Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04209 ATGATTGATAGTGTTGCTAACTTTGCACTGGACAATTTGTCACGGCTGCTTGTTAGTGAAGTGACTTTGCTTTCTAGCGTAAAAGATCAAATCAGGTCCCTAAATGATGAACTGAAGTTCATGAACATCTTTATCAAGAGTTCTGAAGGAAAACGTGAGGATCCATTTGTGAAAGAAGTGGTGAACCAAATCAGAAATGTAGCATACCAAGCTGAAGATGTAGTAGACACCTATGTCGTCAATGTCAACAATCAAAGAAGCAGAAACATGTTGGGGAAGTTCTTCCACAGCAAAGACCATGTGATGATGTTCCATGAGTCTAAATATGGCATCCAACAAGGTGATTTTGAAAGTCATAATGGAAACAAAGAATTTGCAAAAGACTCATTGATTGCGAGAAGGAAGGATGTGGAAGAAGAGGAGATAGTAGGCTTGGTGCATGACTCTGATGAGGTGATTAACCACCTCGCCAGAAGAGGAGATTCGAGTCGTAGAGTTATTTGCATATTAGGCATGGGTGGCTTGGGAAAGACCACTCTTGCTCGAAAGATCTACAACAACAAGAAGATCAAGAGCATATTCCCGTGTCATGTGTGGGGTTTTGTGTCCAACGATTACAGAGCACAAGAATTACTACTGAGCCTTTTGAAGCTTTTGGGGTTATCCTCAGAGGAGTGTAAAGATTTAACTGATAAAGAGAAAATGAAAAGAAAAGTCAGAGAATGCATGAGTGGAAAGAAATACCTGGTAGTCCTAGACGATATCTGGAATATTCAAGTGTGGGACGAGTTGCAAGAAGTCTTTCCTGATGAAAACAATGGTAGCAGAATATTGATAACCACACGTATTGCAGATATCTCTCATTATACAAGAGCAACCTTCACCTATAGACTTCCATTTCTTGACGAAAGTCAAAGTTGGGAATTATTCTGTAAAAAGGTGTTTGGTAAAGAAAAATGTCCTCATGAACTTGAACTTCCTGGAAAAGAAATGGCTAACGCTTGTAAAGGTTTGCCACTTGCCATCATTGTGTTAGCCGGTATGGTTGCCAAAAAAGAGAGGTCACCAAGAGAATGGCTTAAAATCAAGAATCATGTTTCTTGGTATCTTGTTCAGGAGGAAGAATATCGAATTGAGACCAATATTCTGAAGCTTAGCTATGATGACCTTCCTCAAACATTAAAGCCATGCTTTCTTTATTTGGGAGTGTATCCTGAAGATTATGAAATCAATGTGAGAAGATTGTGTCAACTGTGGATAGCTGAAGGGTTCATTCAGAGAAAAGAAGTTGGACCATCAAATTCACCAGAAGTAGAAGATATTGCTGACATGTATTTAGATAAGCTGGTGGAACGGAGCTTGGTGCAAGTGGCAAGTAGGAGGACTGATGGGGGTGTGAAGACATGTCGAGTTCATGATCTTCTTCGTGACCTATGCATTTCAGAAAGTAGGGAAAATAAATTTATGGAAGTGTGCACAAATTTGGATGCTATTAAGTGTAATTCTCGTAGGATGTCTCTCCAGTATAGAGGAGAACTGAGGCTAACCGAAGATACCCAATCATCTGCACGCTCTCTGCTTCTGTTTGGTGAAAGCACTTTCTGGGAGAATGAATCAGAAGGGTGGAAACAGATAAAGAATGGCTTCAAGTTGGCTCGTGTATTGGACATGAACCAAGTGAGGCTATGTTTATCACCTCGTGGATTGACGACATTGATCCATCTAAGGTTTTTGAAAGTTACAGCATCTTCTAGAAGAATTGGAGATGATGTTTTAGCTTCTATATGCAACCTTTGGAATCTAGAAACGCTATACTTATGGATTAAAGACTCTATTACTCTACCAAACAAAATATGGAAACTCAAGTCACTCAGGCATGTGTATTTAAACTGTGATGATATATTTAGAGAAATGACTCAAGTAGAATCAATAATGCAGAGGATGAAAATGGAAGAAGCGTCGAAGATATTTAAAGGATGGTCTGGAGGAGCATCAATGTCGAAGATGAAAATTGGAGAAACAAAGGTGGAGAATCTTCAAACACTGCATAACATCTGTCTTAATGCAAGAACAGCAAGCGTCCTAAAAAAGGGCATGTTCCCCAACTTGACAAAATTAACTTTGCGTGGAGAGGTGACAGAGCTGCCAGAGGCACCAGAAAAAGAATTCTTAGAGAACAGTTTGTGGTGCCTAAACAAACTCCGAACGCTAAAGCTACTTGGCATTTCGAAGCTTCCATTAGATCGGGATGCGTATCCTACAAGTCTTACCAAGATTACCATATCCTTTGGTCAACTGGATGCAAGAATAATAAAGACCCTGGGACAGCTTGCCAACCTGCAAATCTTGAAACTCGGTGGCAGAGGCATATATGGCGATGTTGATTGCGTAGCTGGTGACTTCCCACAGCTTCGAGTACTACAGGTGTGGGGCTGA 2436 0.4039 MIDSVANFALDNLSRLLVSEVTLLSSVKDQIRSLNDELKFMNIFIKSSEGKREDPFVKEVVNQIRNVAYQAEDVVDTYVVNVNNQRSRNMLGKFFHSKDHVMMFHESKYGIQQGDFESHNGNKEFAKDSLIARRKDVEEEEIVGLVHDSDEVINHLARRGDSSRRVICILGMGGLGKTTLARKIYNNKKIKSIFPCHVWGFVSNDYRAQELLLSLLKLLGLSSEECKDLTDKEKMKRKVRECMSGKKYLVVLDDIWNIQVWDELQEVFPDENNGSRILITTRIADISHYTRATFTYRLPFLDESQSWELFCKKVFGKEKCPHELELPGKEMANACKGLPLAIIVLAGMVAKKERSPREWLKIKNHVSWYLVQEEEYRIETNILKLSYDDLPQTLKPCFLYLGVYPEDYEINVRRLCQLWIAEGFIQRKEVGPSNSPEVEDIADMYLDKLVERSLVQVASRRTDGGVKTCRVHDLLRDLCISESRENKFMEVCTNLDAIKCNSRRMSLQYRGELRLTEDTQSSARSLLLFGESTFWENESEGWKQIKNGFKLARVLDMNQVRLCLSPRGLTTLIHLRFLKVTASSRRIGDDVLASICNLWNLETLYLWIKDSITLPNKIWKLKSLRHVYLNCDDIFREMTQVESIMQRMKMEEASKIFKGWSGGASMSKMKIGETKVENLQTLHNICLNARTASVLKKGMFPNLTKLTLRGEVTELPEAPEKEFLENSLWCLNKLRTLKLLGISKLPLDRDAYPTSLTKITISFGQLDARIIKTLGQLANLQILKLGGRGIYGDVDCVAGDFPQLRVLQVWG 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04209 811 PANTHER DISEASE RESISTANCE PROTEIN RP 33 809 IPR044974 GO:0006952
Arst4g04209 811 Gene3D - 300 391 IPR042197 -
Arst4g04209 811 FunFam Probable disease resistance protein At1g61300 127 293 - -
Arst4g04209 811 Pfam NB-ARC domain 149 389 IPR002182 GO:0043531
Arst4g04209 811 Gene3D Ribonuclease Inhibitor 527 811 IPR032675 -
Arst4g04209 811 Gene3D - 6 108 - -
Arst4g04209 811 SUPERFAMILY L domain-like 470 809 - -
Arst4g04209 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 401 IPR027417 -
Arst4g04209 811 PRINTS Disease resistance protein signature 166 181 - -
Arst4g04209 811 PRINTS Disease resistance protein signature 729 745 - -
Arst4g04209 811 PRINTS Disease resistance protein signature 242 256 - -
Arst4g04209 811 PRINTS Disease resistance protein signature 335 349 - -
Arst4g04209 811 Gene3D - 392 481 IPR036388 -
Arst4g04209 811 Pfam Rx N-terminal domain 7 94 IPR041118 -
Arst4g04209 811 Gene3D - 125 294 IPR027417 -
Arst4g04209 811 FunFam Probable disease resistance protein At1g63360 387 481 - -
Arst4g04209 811 CDD RX-CC_like 3 102 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04209 Arst-Chr4 120226159 120228649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04209 165 803 WRKY Transcription Factor Family AT5G45050 23.222 5.90e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04209 - - aip:107635641 1519.6