Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04207 ATGATGGTTTCGAGAGGATTGTTCGGTTGGTCCCCGCCGCACGTGCAACCTCTGACGCCGGTTTCGGAGGTTTCGGAGCCGCCGGAGTCTCCGTCGCCGTACCTTGACCCGGGTGCCGAGACCTCCGCGTCGCAGCAGCAGGTGGAGGTCGATGAGGAGATTGAGGAGCCGGAGGAGGTCGAGCCTCCGCCGGCGGCGGTTCCTTTCTCGAGGCTCTTCGCCTGCGCTGACCGGTTCGACTGGTTCCTCATGGCTGCTGGTTCGGTCGCCGCCGCAGCTCACGGCGCCGCCCTCGTCGTTTACCTGCACTATTTCGCGAAGATCATACATGTGCAGGTGGAACCTAAGCACGAGCTGTTTCACAGGTTCAATGAGCTTGCTTTAACCATTGTTTATATTGCCGCGGGAGTTTTTGCAGCTGGTTGGATTGAGGTTTCTTGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTCATAAGGTCAAAATATGTTCAAGTGTTACTAAATCAAGATATGAGCTTTTTTGATACTTATGGAAATAATGGAGACATTGTAAGTCAAGTATTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCACAATATGGCTACGTTCTTCAGTGGTCTTGTCATTGGACTCATAAATTGTTGGCAGATTGCTCTGATAACGTTAGCAACAGGTCCGTTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTCCACCGACTTGCAGAGAATATTCAAGATGCATATGCTGAAGCGGCTAGCATTGCCGAACAGGCAGTTTCGTATGTAAGGACATTGTATGCATTCACAAATGAAACATTGGCCAAGTATTCCTATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTTGGAAGGTTCTTGGTTATACATGGAAAAGCACATGGTGGTGAAATTATAACAGCCCTGTTTGCTGTAATTCTAAGTGGCTTGGGATTGAATCAAGCAGCAACCAACTTCTACTCTTTTGATCAGGGGAGAATTGCTGCTTATAGATTATTTGAGATGATAAGCCGGTCATCCTCATCTGATGATCATGACGGCATTACTCCTGATTCTGTGCAAGGAAATATAGAGTTTCGGAATGTTTATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTTAGTGTACCTGCTAAGAAAGCTGTGGCTCTTGTTGGCAGAAATGGCTCTGGGAAAAGTAGTATTATTCCACTAATGGAGCGTTTCTATGATCCTACATTAGGGGAAGTTCTTCTAGATGGAGAAAACATCAAGAACTTGAAACTTGAATGGCTTAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTTAGTTTGAGTATAAGAGATAATATTGCTTATGGGAGGGATGCCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTGGAGAAAGGTTATTACACACAGGTTGGCAGGGCTGGTCTGGCTTTGACTGAAGAGCAAAAAATAAAACTTTCTATTGCTAGAGCTGTGCTTTTAAATCCATCGATTCTTCTACTTGATGAGGTTACTGGTGGTCTTGATTTTGAGGCTGAGAGGGCTGTTCAGGGGGCTTTGGACCTACTTATGTTGGGACGCTCAACAATAATAATTGCTCGACGGCTTAGTCTCATAAGGAATGCTGATTATATCGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAATTATTGTCCTTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAATTACAAGGAGACTGCAGTGTTTCAAATTGAGAAGGATTCTTCAGCAAGTCATAGCTTCAAAGAACCATCATCCCCTAAAATGTTGAAGTCACCTTCTCTTCAAAGAGTATCTAATGTATCCCGCCCTCCAGACGGAAGCTTTAACTTGCTTGAATCTCCAAAGGCCCGGAGCCCACCACCTGAGAAGATGGTGGAAAATGGTCAAGCTCTTGATGGAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAGATGAGACTTCCAGAGTTACCTAAGCTTGATGTGCAGTCTCTGCATCGTCAAAAATCAAATGGTTCTGACCCAGAATCTCCTGTTTCTCCCCTTTTAACATCTGATCCCAAGAGTGAACGCTCTCATTCGCAGACTTTTAGTAGAACGCAGAGTTACTCTGATGATCTTTCGGCTGAAAAGAGAAAATTGAAGGATACAAGGCATCAAAAACCACCATCACTTAGGAAGCTTGCTGAGCTTAGCTTCGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATTTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTGATTGGCCTTGTGGTGACAGCTTACTATAATATTGATAAAGATCATCACTTACGATGGGAGGTAAACAAGTGGTGTTTGGCCATTGGCTGCATGGGTATTGTGACAGTAATTGCCAACTTTTTACAGCATTTCTACTTTGGTATCATGGGGGAGAAAATGACAGAAAGGGTTAGGAGAATGATGTTCTCAGCCATGCTTCGGAATGAAGTTGGGTGGTTTGATGATGAGGAAAACAGTGCTGACAATTTATCCATGCGATTGGCCAATGATGCTACTTTTGTACGAGCTGCTTTTAGCAATAGGCTGTCTATATTTATTCAGGACAGTGCTGCAATTATTGTTGGTCTTCTAATTGGTGCCTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTGCTGCAATTGCCCAGAAGATGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCATAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAACATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAACTTTATAGGCTGCAGTTGAAGAAAATATTTAGGAAGAGCTTTCTTCATGGGATGGCAATCGGTTTTGCATTTGGCTTTTCACAGTTCCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGGGAGATGTGTAAAAAATGGTTATGTGCAACTATCTACTGCACTCAAGGAGTATATGGTTTTCTCATTTGCGACATTTGCGCTTGTAGAGCCTTTTGGATTGGCTCCTTACATCCTTAAACGACGGAAGTCTCTCATATCAGTGTTTGATATCATAGATCGTGTGCCTAAAATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTACATGGAAGAATTGAGTTAAAAAATGTTGATTTCTGTTACCCAACTCGTCCAGAAGTTTTGGTATTGAGCAATTTTAGTCTCAAAGTCAATGGTGGGCAAACGGTTGCTATTGTGGGAGTTTCTGGGTCAGGAAAGAGCACTATTATATCGTTGATTGAGAGGTTTTATGATCCAGTTTCTGGCCAAGTGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCGAGGCACAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCCCATCACTTTATTAGCAGCTTGCCTCATGGTTATGACACTCACGTTGGGATGCGAGGTGTTGACTTAACTCCTGGACAAAAACAGAGAATTGCAATTGCGAGGGTTGTGCTGAAAAATGCACCTATCTTGTTGTTGGATGAAGCAAGCTCATCAATTGAATCCGAGTCAAGCCGGGTGGTGCAAGAAGCTCTAGACACACTAATAATGGGGAACAAGACCACCATTTTAATTGCGCATAGGGCTGCAATGATGAGGCATGTGGACAATATCGTAGTGCTTAATGGGGGACGGATAGTGGAGGAGGGGACTCATGATTCATTGATGGCTAAGAATGGTCTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGTTTAG 4128 0.4363 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQQVEVDEEIEEPEEVEPPPAAVPFSRLFACADRFDWFLMAAGSVAAAAHGAALVVYLHYFAKIIHVQVEPKHELFHRFNELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSDDHDGITPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYYTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLSLDGLYAELLRCEEAAKLPKRMPVRNYKETAVFQIEKDSSASHSFKEPSSPKMLKSPSLQRVSNVSRPPDGSFNLLESPKARSPPPEKMVENGQALDGADKEPSIRRQDSFEMRLPELPKLDVQSLHRQKSNGSDPESPVSPLLTSDPKSERSHSQTFSRTQSYSDDLSAEKRKLKDTRHQKPPSLRKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYNIDKDHHLRWEVNKWCLAIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAIIVGLLIGALLHWRLALVAFATLPILCVAAIAQKMWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFRKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGRCVKNGYVQLSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDSSALKPPNVHGRIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVSGQVXEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLMAKNGLYVRLMQPHFGKALRQHRLV 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04207 1376 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 85 370 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g04207 1376 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1119 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g04207 1376 SUPERFAMILY ABC transporter transmembrane region 71 383 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 MobiDBLite consensus disorder prediction 665 789 - -
Arst4g04207 1376 SUPERFAMILY ABC transporter transmembrane region 809 1135 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 FunFam ABC transporter B family member 20 71 402 - -
Arst4g04207 1376 MobiDBLite consensus disorder prediction 1 63 - -
Arst4g04207 1376 Gene3D - 393 640 IPR027417 -
Arst4g04207 1376 Gene3D - 393 640 IPR027417 -
Arst4g04207 1376 MobiDBLite consensus disorder prediction 751 789 - -
Arst4g04207 1376 Pfam ABC transporter 424 568 IPR003439 GO:0005524
Arst4g04207 1376 CDD ABC_6TM_Pgp_ABCB1_D1_like 116 378 - -
Arst4g04207 1376 FunFam ABC transporter B family member 6 767 995 - -
Arst4g04207 1376 PANTHER ABC TRANSPORTER B FAMILY 45 640 IPR039421 -
Arst4g04207 1376 PANTHER ABC TRANSPORTER B FAMILY 45 640 IPR039421 -
Arst4g04207 1376 MobiDBLite consensus disorder prediction 726 750 - -
Arst4g04207 1376 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1150 1364 IPR003439 GO:0005524
Arst4g04207 1376 CDD ABC_6TM_Pgp_ABCB1_D2_like 822 1133 - -
Arst4g04207 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 637 IPR027417 -
Arst4g04207 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1363 IPR027417 -
Arst4g04207 1376 Gene3D - 1211 1364 IPR027417 -
Arst4g04207 1376 Gene3D - 1148 1209 IPR027417 -
Arst4g04207 1376 Gene3D - 1211 1364 IPR027417 -
Arst4g04207 1376 Gene3D - 1148 1209 IPR027417 -
Arst4g04207 1376 Pfam ABC transporter 1168 1293 IPR003439 GO:0005524
Arst4g04207 1376 FunFam ABC transporter B family member 20 393 640 - -
Arst4g04207 1376 Pfam ABC transporter transmembrane region 832 1096 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g04207 1376 Pfam ABC transporter transmembrane region 88 353 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g04207 1376 FunFam ABC transporter B family member 6 997 1147 - -
Arst4g04207 1376 Gene3D ABC transporter type 1, transmembrane domain 1002 1147 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 Gene3D ABC transporter type 1, transmembrane domain 770 998 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 SMART AAA_5 1177 1341 IPR003593 GO:0016887
Arst4g04207 1376 SMART AAA_5 430 609 IPR003593 GO:0016887
Arst4g04207 1376 Gene3D ABC transporter type 1, transmembrane domain 1002 1147 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 Gene3D ABC transporter type 1, transmembrane domain 770 998 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 638 IPR003439 GO:0005524
Arst4g04207 1376 Gene3D ABC transporter type 1, transmembrane domain 71 656 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 MobiDBLite consensus disorder prediction 665 697 - -
Arst4g04207 1376 Gene3D ABC transporter type 1, transmembrane domain 71 656 IPR036640 GO:0005524|GO:0016020
Arst4g04207 1376 Coils Coil 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04207 Arst-Chr4 120169826 120178873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04207 54 695 Calmodulin-binding Proteins AT2G36910 44.393 1.07e-167 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g04207 4 120169826 120178873 Arst4g04207 4 120169826 120178873 ECH