Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04200 ATGGAGATAACCTACGCATCCCCCAGCTTCGCCGACCTCTCTTCCGCCTCCATGACGTCGCCGGCGACCAACACTACCTCCGCCGCCACCGGAACAGCCACATCCCGTCCGGTCAGGATCATCCCCCTTCAGCACCCGAACATTACGAGGACGTCTTCTTCTTCGTCTTCCTCGTCGCCGCCGCCGTTTCCGTTCTCTCGGTGGGCGATGAAGCTCCGGCGAATGACGTGGATCGAGTGGATCGAGTTCTTCCTACCTTGCATGCGATGGATTCGCACTTACAAATGGCGCGAGTACTTCCAGACCGATCTCATGGCCGGCATCACCGTCGGCGTCATGCTCGTTCCTCAGTCGATGTCTTATGCAAAATTAGCAGGACTGCAACCGATATATGGACTTTACTCTGGGTTTGTTCCCCTATTAGTGTATGGGCTATTTGGTTCTTCTCGCCAGCTTGCAGTTGGTCCAGTCGCATTGGTTTCTCTCTTATGCTCCAATGTGCTAAGTAGCATAACTGATCCATCCAGTGAATTATACACAGAACTGGCAATACTATTGGCTCTTATGGTTGGGATAATGGAATGCATAATGGGAATCTTGAGGCTGGGGTGGTTGATTCGTTTCATTAGCCATTCAGTGATATCTGGGTTTACAACTTCTTCAGCTATCATCATTGGTTTATCTCAAGCAAAATACTTCTTGGGATACGATGTAGTCAATAGTAGCAAAATCATACCCCTGGTTGAGAGTATAATAGCTGGAGCACATAAGTTTAAATGGCAGCCTTTTGTGATGGGGTCAATTATGCTTGCAATACTACTTACCATGAAACACCTGGGAAAATCGAGGAAGCAGCTAAGATTTTTAAGAGCCGCAGGTCCCCTCACTGCAGTTGTTCTGGGAACTATCTTTGCGAAAATATTTCATCCATCATCAATTTCTCTGGTGGGAGATATACCTCAGGGCCTTCCGACATTTTCTGTTCCTAAAGCTTTCGGGTATGCAGAATCTTTAATTCCAACTGCTGCTCTTATAACTGGTGTGGCGATATTGGAATCTGTGGGTATTGCCAAGGCATTAGCAGCTAAAAATGGGTACGAGTTGGACTCAAATCAAGAGTTGGTTGGCCTTGGTGTTTCGAATGTTCTTGGCTCATTCTTTTCAGCATACCCTACTACAGGTTCATTTTCAAGGTCAGCTGTTAACAATGAAAGCGGTGCCAAATCTGGAGTATCTGGGATTGTTTCTGGAATTATAGTGACCTGTGCACTTTTATTCTTTACTCCATTGTTTGAGTACATACCTCAGTGTGGTCTTGCTGCTATTGTTGTCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATCTTTTTGTGGCGTGTAGATAAAAAGGATTTTCTTCTTTGGACCATTACTAGCATTACAACGTTGTTCTTTGGTATTGAAGTTGGTGTACTTGTTGGGGTTGGTGTCTCACTTGCCTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGAAATGTTAAACAGTATCCTGAAGCATATACATACAACGGAATTGTAATAGTTCGTATTGATGCTCCTATTTATTTTGCAAACACAAGTTATATAAAGGACAGGTTGCGGGAATATGAAATCGATTTTGTTAATTCTACAAGCCGCTGCCCCGAGGTTGAAAGAATTTACTTTGTGATTCTAGAGATGGCACCTGTGACCTATATAGACTCTAGTGCTGTTCAGGCTCTGAAAGACTTGTATCAGGAGTACAAATTACGGGGCATCCAGATTGCAATATCAAATCCAAGCCCAGAGGTTCTTCTTACCTTGTCTAGGTCTGGGGTGGTGGATCTGATCGGCAAAGAGTGGTACTTTGTGAGGGTACATGATGCTGTTCAAGTTTGCTTGCAGCGTGTTCAAAACCTTAAAGGAGTATCCAACGGTTCATCAAGAGCACCCACTCTTTCAGAAGACAAACCAAGCTTGTTTGAGCGATTACTAAAACAGAGAGGAGAAAACTTGTCAATTACCGACTTGGAGTCTGGTAATGGCAGACCTCCACCCTCCAATAATGACAAAGCATCCCATTTGGAACCGTTGTTACCAAAACAACAGTGA 2154 0.4461 MEITYASPSFADLSSASMTSPATNTTSAATGTATSRPVRIIPLQHPNITRTSSSSSSSSPPPFPFSRWAMKLRRMTWIEWIEFFLPCMRWIRTYKWREYFQTDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPLLVYGLFGSSRQLAVGPVALVSLLCSNVLSSITDPSSELYTELAILLALMVGIMECIMGILRLGWLIRFISHSVISGFTTSSAIIIGLSQAKYFLGYDVVNSSKIIPLVESIIAGAHKFKWQPFVMGSIMLAILLTMKHLGKSRKQLRFLRAAGPLTAVVLGTIFAKIFHPSSISLVGDIPQGLPTFSVPKAFGYAESLIPTAALITGVAILESVGIAKALAAKNGYELDSNQELVGLGVSNVLGSFFSAYPTTGSFSRSAVNNESGAKSGVSGIVSGIIVTCALLFFTPLFEYIPQCGLAAIVVSAVIGLVDYDEAIFLWRVDKKDFLLWTITSITTLFFGIEVGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANTSYIKDRLREYEIDFVNSTSRCPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRGIQIAISNPSPEVLLTLSRSGVVDLIGKEWYFVRVHDAVQVCLQRVQNLKGVSNGSSRAPTLSEDKPSLFERLLKQRGENLSITDLESGNGRPPPSNNDKASHLEPLLPKQQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04200 717 SUPERFAMILY SpoIIaa-like 525 647 IPR036513 -
Arst4g04200 717 Pfam STAS domain 524 643 IPR002645 -
Arst4g04200 717 Pfam Sulfate permease family 100 473 IPR011547 GO:0016020
Arst4g04200 717 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Arst4g04200 717 Gene3D STAS domain 503 651 IPR036513 -
Arst4g04200 717 PANTHER SULFATE TRANSPORTER 66 650 IPR001902 GO:0016020|GO:0055085
Arst4g04200 717 MobiDBLite consensus disorder prediction 686 717 - -
Arst4g04200 717 NCBIfam sulfate permease 86 643 IPR001902 GO:0016020|GO:0055085
Arst4g04200 717 CDD STAS_SulP_like_sulfate_transporter 524 640 - -
Arst4g04200 717 ProSiteProfiles STAS domain profile. 523 647 IPR002645 -
Arst4g04200 717 FunFam Sulfate transporter 31 503 650 - -
Arst4g04200 717 MobiDBLite consensus disorder prediction 686 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04200 Arst-Chr4 120125715 120132031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04200 3 653 Inorganic Solute Cotransporters AT5G13550 71.756 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04200 K18059 - gmx:100794754 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g04200 4 120125715 120132031 Arst4g04200 4 120125715 120132031 ECH