Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04172 ATGGCAGGTTCATCATCAGATCATGATGAAACACCATTGTCATATTTCAAGTATGATGTTTTTCTGAGCTTCAGAGGTCACACAAGACGCGAATTCACAGACGCACTCTATCATGCTTTGGTCAACAAAAGAATCGAGACTTTCAGAGATAGCGAGAAGCTCAGAATAGGTGAGGAACTCGAAGGTGCTCTTGTTGAAGCAATTGAAAGATCAAGGATGTCAATTCTTATACTGTGCGACGAGTATCCAACTTCCAAGTGGTGCCTTGATGAACTCGTCAAGATCATGGAGTGTTCCGGCAACGGAACAAGGCGACCGGTGTTACCGGTCTATTTCCGCGTGGCAAAATCAGATGTGCAGTTTCAGAAAAATAAGTATGAAACAGCCATGGCTGCTCATCAAGAAAAAGGAAGAAACAACCACAAGCTGGAAGCATGGAAGTCAGCGTTGTCTGAAGTAGGCAAGATTTATGGTCAACGTTGTGATCAGAAAACAGCATGGGGTGAGGCTATTGACAACATTGTTGAAGAGGTCACAACAAGACTTCCTCCTCCGCCTCTATATATCGACCGTCCACTTGGATGTGATTCTGAACTTGAGGAGGCAAAATCACTTCTAGAGATTGGTTCTCATGCTACCTGTTTCATGCTGGGAATTCATGGAGATGGTGACGAAATAAGCAAATTTGTTGCAGAGCTGTATAACAAGATTAGGCCTCACTTTGTAACTGCAAGTTTTCTTTCCAATATCAGTGAGAAAACAAATGAAAGTGGTGGTGGCCTAGAACATCTACAAGAAACTCTTCTTTCTGAGATGGGAGAGGAGGTCAGGACTAAGATTGGAAGCACATTCAAAGGATCCTCTGAAATAAAACAAAGACTAGGCCAAAAAAGAGTTCTTCTAGTTTTGGATGATGTTGATAGTATACAACAACTGGATTCACTAGCTAGAAGAACTGATTGGTTTGGTCCTGGTAGTAGGATCATTATAACAACAAGATATGAAGATGTGCTAGATGATCATGTTTTGAACAATGGTGTTGAGGTTAAGAAATATTGCATCGCTGAAGGAAGTAGTTCTGCTGTGAAGGAAGAAAATGTAGTGGGATTGGAGAAAGATTTTGAAATTGTGATTAATCAACTCAAGGAAGAAGATTCACCTTGGAATGTTGTTTCCATTGTTGGCATGGGTGGGTTAGGCAAGACCACCCTTGCTCGAATGATCTACAATAGCGATGAGGTGAAGATGTTATTCCCTTGCCGTGCATGGGCAACTGTTTCCAAGGATTACAGTGGAAAGGAAGTTTTTAAAAGCCTTCTCAAGTGTCTGAAGCCGTCTGCATCTAAATTTGAAGATTCAAGTAGTGAAGTTGAGCTAAAGCAGAAGGTAAAGAAATGTCTGGAAGGAAAAAAGTACTTGGTAGTCCTTGATGATGTCTGGGACAGTAAAGCATGGCGCACTATAAAGAATTGTTTCCCAGAAAACAACCATGGTGGCATGATACTGGTAACTACTCGGAATGATCAGGTGGCCTATGCTTCAGAGTCAAAGGAACCTCATCACAAGCTTTCCTTTATGGATAAAGAAAGAAGTTGGGAACTGTTTCACAAGGAGGTTTTCTGCAGAAGAAATTGTCCTCCTGAGCTAGAATCTATTGGCAGATCAATTGTTGAAACTTGCAAGGGTTTACCATTGGCTATCAAAACCACAGCTGGGCTTGTTGCAAAGAGGGAGAGATCAGAGGATGCATGGGAAGAGATTATGAATTTACTGCCTTATTGGAGTGTTGCTGATGAGGATAGTAGTGAGGAGATGATGGAGCTTTTGAAGTTTAGCTATGATGATTTGCCCAACAAAATGAAGCCATGCTTTCTATATCTTGGGGTGTTTCCTGAAGATGAAGAGATTTGGGTGAGAGATTTAATCCGTCTATGGATAGCAGAAGGGTTCATAGAGCCAATTCAAACTGGAAGATCAAAATCACCCCCACAACTTGAAGATATTGGTGAGGAATACTTGAAGGAGCTAGTGGATCGTAACTTGGTACAAGTGGCAAAGAGAAGGAGTGATGGCAAAGGCGTGAAAACATGTCAGATCCATGATCTCTTCCGGGAATTGTGCATATCAGAGAGCAACAATCCTGATAACAACAATAACAATGCTCGTAGACTGTCCTTTCCTGGGGATATAGGATCCTATTCATGTTTAGTAACATGTAATCAATCATGCACTTGTTCCTTGTTCGTTTATGGAGATGATACACAAGAGTGGCCACATCATATTCCAGAAGATTGCCGAGTTAATGTGATATATTTTGCGGATGGGTTCACAGATCTAAATGAGTATTTGAAGCAGTTGAAAAGCCTCAAGTTCTTGAAAATGTTCTTCTCTGAATCATATGAGTTATGTAAGCTTCAGAGTTTAAAAACGTGTCATGTGATGATGATCATTGAGAAAGACCTAAGTATTGGGAGGTTAAAGCAACTGAGACATCTTCGTTGTGAAAATGGCTTGAATTTATCAGTAGATGAAGAAGTAGTAAAAGATAAAATGCAGAATCTCCAAACACTATGTTATGTATCTGCCGATTCACAACTAGGGAGCTTACTCGACAAACTTAAGGAGCCTGCACTGCCTAAACAATCTACCTTTAAGGATTTGAAATCTAAAGATATGAATACCTTGGGACAAATTCCCAGCCTTCAGATTTTAAAACTGAGATTTGGAAGCTGTGAGGAAGAAACTCTTAATTGTGGTGCTACTGGGAGCTTTCTGCGGCTTCAAGTGTTTATCATGGACGGTGTGAATATCACATGTCTTACATCAGAAGAAGGTGTGATGCCTCGTCTTCGACGTGCCGTCTTCTATAACTGCCCTGACTTGAAGGAGGTTACTAAACAAATGCGTTCATTGGGTAGTAACTTGGAGTTTATAGAATATGATGTTAATCATGGTTTATCTCTTGGGTAG 2970 0.4077 MAGSSSDHDETPLSYFKYDVFLSFRGHTRREFTDALYHALVNKRIETFRDSEKLRIGEELEGALVEAIERSRMSILILCDEYPTSKWCLDELVKIMECSGNGTRRPVLPVYFRVAKSDVQFQKNKYETAMAAHQEKGRNNHKLEAWKSALSEVGKIYGQRCDQKTAWGEAIDNIVEEVTTRLPPPPLYIDRPLGCDSELEEAKSLLEIGSHATCFMLGIHGDGDEISKFVAELYNKIRPHFVTASFLSNISEKTNESGGGLEHLQETLLSEMGEEVRTKIGSTFKGSSEIKQRLGQKRVLLVLDDVDSIQQLDSLARRTDWFGPGSRIIITTRYEDVLDDHVLNNGVEVKKYCIAEGSSSAVKEENVVGLEKDFEIVINQLKEEDSPWNVVSIVGMGGLGKTTLARMIYNSDEVKMLFPCRAWATVSKDYSGKEVFKSLLKCLKPSASKFEDSSSEVELKQKVKKCLEGKKYLVVLDDVWDSKAWRTIKNCFPENNHGGMILVTTRNDQVAYASESKEPHHKLSFMDKERSWELFHKEVFCRRNCPPELESIGRSIVETCKGLPLAIKTTAGLVAKRERSEDAWEEIMNLLPYWSVADEDSSEEMMELLKFSYDDLPNKMKPCFLYLGVFPEDEEIWVRDLIRLWIAEGFIEPIQTGRSKSPPQLEDIGEEYLKELVDRNLVQVAKRRSDGKGVKTCQIHDLFRELCISESNNPDNNNNNARRLSFPGDIGSYSCLVTCNQSCTCSLFVYGDDTQEWPHHIPEDCRVNVIYFADGFTDLNEYLKQLKSLKFLKMFFSESYELCKLQSLKTCHVMMIIEKDLSIGRLKQLRHLRCENGLNLSVDEEVVKDKMQNLQTLCYVSADSQLGSLLDKLKEPALPKQSTFKDLKSKDMNTLGQIPSLQILKLRFGSCEEETLNCGATGSFLRLQVFIMDGVNITCLTSEEGVMPRLRRAVFYNCPDLKEVTKQMRSLGSNLEFIEYDVNHGLSLG 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04172 989 Gene3D - 180 344 IPR027417 -
Arst4g04172 989 Gene3D - 354 518 IPR027417 -
Arst4g04172 989 Gene3D - 526 617 IPR042197 -
Arst4g04172 989 Pfam TIR domain 17 178 IPR000157 GO:0007165
Arst4g04172 989 FunFam Probable disease resistance protein At1g63360 613 709 - -
Arst4g04172 989 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Arst4g04172 989 Gene3D - 16 179 IPR035897 -
Arst4g04172 989 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Arst4g04172 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 346 IPR027417 -
Arst4g04172 989 FunFam Probable disease resistance protein At1g61300 350 519 - -
Arst4g04172 989 PRINTS Disease resistance protein signature 784 800 - -
Arst4g04172 989 PRINTS Disease resistance protein signature 466 480 - -
Arst4g04172 989 PRINTS Disease resistance protein signature 560 574 - -
Arst4g04172 989 PRINTS Disease resistance protein signature 390 405 - -
Arst4g04172 989 SUPERFAMILY L domain-like 693 978 - -
Arst4g04172 989 Gene3D - 618 708 IPR036388 -
Arst4g04172 989 Gene3D Ribonuclease Inhibitor 763 987 IPR032675 -
Arst4g04172 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 627 IPR027417 -
Arst4g04172 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 338 IPR044974 GO:0006952
Arst4g04172 989 SMART till_3 17 156 IPR000157 GO:0007165
Arst4g04172 989 Pfam NB-ARC domain 371 615 IPR002182 GO:0043531
Arst4g04172 989 Pfam NB-ARC domain 262 341 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04172 Arst-Chr4 119993290 119996962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04172 65 350 WRKY Transcription Factor Family AT4G12020 28.028 2.68e-16 82.4