Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04168 ATGCAGAACGAGGAGGGACAGATCACTGAGCTCTACATTCCTAGGAAGTGCTCTGCAACAAACAGGTTGATAACTGCAAAGGACCATGCGTCAGTTCAGATCAACATTGGTCACTTGGATGAGAGTGGTCTCTACAATAACACCTTCTCCACATTTGCCCTCTGCGGCTTCATTCGTGCTCAGGGTGATGCCGACAGTGCACTAGACCGCTTGTGGCAGAAGAAGAAAGCCGAGAAGCAGCAGTAG 246 0.5 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGLYNNTFSTFALCGFIRAQGDADSALDRLWQKKKAEKQQ 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04168 81 FunFam 40S ribosomal protein S21 1 81 - -
Arst4g04168 81 PIRSF RPS21e 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Arst4g04168 81 Gene3D - 1 81 IPR038579 -
Arst4g04168 81 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Arst4g04168 81 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Arst4g04168 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04168 Arst-Chr4 119976592 119987058 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04168 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.481 1.72e-49 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04168 K02971 - qsa:O6P43_003555 155.606