Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04160 ATGGCAGGTTCCTCATCATCAGATCAAGGTGTATCACATTTCAAGTATGATGTTTTTCTGAGCTTTAGAGGCTACACAAGACTCGAATTCACAGACGCACTCTATCATGCTTTGATCAACAGAGGAATCCACACCTTCAGAGATAACGACGAGCTGAGAATAGGCGAGGAACTGGAAGGTGCTCTTCTTGAAGCAATTGAAAGATCAAGGATGTCAATTCTTGTACTCTGTGATGAGTATCCAACTTCCAAGTGGTGCCTTGATGAACTCGTCAAGATCATGGAGTGTTCCGGCAACGGAACAAAGCGACCGGTGTTACCGGTCTATTTCCGTGTGGCAAAATCAGATGTGCAGTTTCAGAAAAATAAGTATGAAACAGCCATGGCTGCTCATCAAGTAAAAGGCAGATACAATCACAAGTTGGAAGCATGGAGGTCAGCCTTGTCTCGAGTAGGCAAGATTTATGGTCAACGCTGTGATCAGAATACACCATTTGGTATTGCTATTAACAACATTGTCCAAGAGGTCATAGAAGGACTTCCTCCTTTGCCTCTGTATATTCACCATCCACTTGGATGTGATTCTAAACTTGAAGAGGCAAAATCATTTCTACAGATTGGTTCATCTGATGCTAGCCGTTTGATGCTGGGAATTCATGGAGATGGTGACCTAAGTCAATTTGTTGCGGAGTTGTATAACAAGATTAGGTGTGACTTTGCAACTGCAAGTTTTCTTTCCGGTATCAGTAAGAAAACAAATGCAAGTGGCGGTGGCCTAGAAGATCTACAAAAAACGCTTCTTTCTGAGATGAAAGAGAAGGTAAAGAATAAGATCGGAAGCACATTCCGTGGATCTTCTGAAATAAAACAAAGACTAGGCAAAAAAGGAGTTCTTCTGATTTTGGATGATGTTGATAATATACAACAACTGAAATCACTAGCCGGAGAAATCGATTGGTTTGGTCCTGGCAGTAGGATCATCATAACAACAAGATATGAAGATGTGCTAGATGAGCATGCTGGTGTTGATATTAAGAAATATCGCTTCGATGAAGGTGAATTCGAAGGCCACAGAGGAGAAAATGTAGTGGGATTGGAGGAAGACTTGGATGTAATAATTAACCAACTCAAAGAAGAAGATTCTGCTAGGAATGTTGTTTCCATTGTTGGCATGGGTGGGTTGGGCAAGACTACTCTTGCCCGAAAGGTGTACAATAGCGATGAGGCCAGAGAGCTATTTCCTTGCCGCGCATGGGCAACCGTTTCCAAAGAGTGCATGCCAACGGAAGTTTTCAAAAACCTTCTCAAGTGTTTGAAGGTAGACGAAGCTGAATATAAAAAAGCAGATGAAGAGAAGTTGAAAGATATGGTGAGAAAACGTTTGAATGGGAAAAAGTACTTGGTAGTGCTTGACGATATCTGGGAAGCAAACGTATGGGACAAGGTAAAGGGTCCTTTACCGGATAACAACAATGGCAGCATGATACTAGTAACTACTCGTAATGATCGAATGGCGAATTATGCAAGGTCAAAGGAGCCTCACCACCAACTACACTTCTTAGATGAAGATCAAAGTTGGGAAATGTTTCGCAATAAGGTGTTTGGCAGAGAAGAGTGTCCTCCTCCTTTAGAGCTTATTGGAAGATCAATTGCTTTCGAAAGCTGCAAAGGTTTACCATTGGCTATCAAAACCATAGCCGGGATTGTCGCGAAGAAGGGGAGATCAAAGGATGCATGGGAAGAAATCAAGGACCTGCTCCCTTATTGGTCTGTTGCTGAAGACCCGGAAGGTAAAGAGATGATGAAGATATTGAAGTATAGCTACGATGATCTGCCTGAGAAAATGAAGCCATTCTTCCTATATCTTGGTGTGTTTCCTGAAGATGTAGAGATTCGGGTGAGAGACTTAATCCATGTATGGATGGCAGAAGGATTCTTAGAACCAATCCAGACTGGAAGATCAAAACCACCACCAGAACCTGAAGATATTGGTGAGCAATACTTGAAGGAGCTAGTGGATCGTAACTTGGTACAAGTGGCCAAGAGGAGGAGTGATGGCAAAGGCGTGAAAACATGTCAGATCCACGATCTCATCCGCGATCTGTGCATATTGGTGAGTAAAGACAACCCTGATAACAGTAACAATGCTCGCAGGTTTACCTTTTTCAGGAGCATAGGATCCTATGCATGTTCGGTAACATGTAATCATTCAAGCACTTGTTCCTTGTTCGTTTATGGAAATGTCGACGGGTGGTCAAATCATATTCCAGCAGATTGCCCAGTCAATGTGCTATATTTGAATGGATTGGATGGGGAGCTAACATTTATAGAGAATGCTCAGTACTTGGAGAGGTTGAAAAGCATCAAGTTCTTGAAAATGGATTATGCTGCCTTACATCGGTTATTTAGGCTTCAGAGTTTACAAACAATGCATGTAATATCCACTTTTGATAGGGAGAAAATAAGTGTTAAGGGGTTAAAGCAAATGAGACATTTTCGTTGCCACTCCACAGAGCATTTGTTGGTAAATGAAAGGGTAAAACATAGAATGGAGAATGTCCAAACCCTGTTTTTTGTGTCTGCAGATTCACAACTAGGGATCTTACTCAACAATGGCTGCTTTCCCAACTTGAGAACGCTGGGTTTAGTGATAAGTGAAGACGAAGGTCATTTAGTAGACGTAAACTTGAGGAGCCTGCACCGCCTAAGCGAGCTTCGTAAACTGAAACTTGAGTTTGACATCTCTGTAAGAGTTCCATTAGGTAACATTACATTTCCGTCAAATCTTAGCAAGATTGTCTTGACATGGTGTAATGGTTTGGAGTACCAAGACATGAATGCTTTGGGACGGATTCGCAGGCTTCAAATTTTAAAATTATATGAAGTAGGTTGTTCCCAAAAGGTCCTTAATTGTGGTAGTGCTGGAAGCTTTCCGCAGCTTCAAGTGTTTATCATGATATTTGTGAATGTCACGTGTGTTACATTAGAAGATGGTGCGATGCCTAGACTTCGACGTGCTGTCTTTCGTGAGTGCCCTGGCTTGATGTTGCAGTCCCTTCCTGAACAAATGCTTTCCTTGGATAGTAACTTGCATTTTATTGAATATAAGGAGGAGAGGAGGACGAGGAGGAGGAGGACGAGGAGGAGGATTGATTGA 3156 0.4211 MAGSSSSDQGVSHFKYDVFLSFRGYTRLEFTDALYHALINRGIHTFRDNDELRIGEELEGALLEAIERSRMSILVLCDEYPTSKWCLDELVKIMECSGNGTKRPVLPVYFRVAKSDVQFQKNKYETAMAAHQVKGRYNHKLEAWRSALSRVGKIYGQRCDQNTPFGIAINNIVQEVIEGLPPLPLYIHHPLGCDSKLEEAKSFLQIGSSDASRLMLGIHGDGDLSQFVAELYNKIRCDFATASFLSGISKKTNASGGGLEDLQKTLLSEMKEKVKNKIGSTFRGSSEIKQRLGKKGVLLILDDVDNIQQLKSLAGEIDWFGPGSRIIITTRYEDVLDEHAGVDIKKYRFDEGEFEGHRGENVVGLEEDLDVIINQLKEEDSARNVVSIVGMGGLGKTTLARKVYNSDEARELFPCRAWATVSKECMPTEVFKNLLKCLKVDEAEYKKADEEKLKDMVRKRLNGKKYLVVLDDIWEANVWDKVKGPLPDNNNGSMILVTTRNDRMANYARSKEPHHQLHFLDEDQSWEMFRNKVFGREECPPPLELIGRSIAFESCKGLPLAIKTIAGIVAKKGRSKDAWEEIKDLLPYWSVAEDPEGKEMMKILKYSYDDLPEKMKPFFLYLGVFPEDVEIRVRDLIHVWMAEGFLEPIQTGRSKPPPEPEDIGEQYLKELVDRNLVQVAKRRSDGKGVKTCQIHDLIRDLCILVSKDNPDNSNNARRFTFFRSIGSYACSVTCNHSSTCSLFVYGNVDGWSNHIPADCPVNVLYLNGLDGELTFIENAQYLERLKSIKFLKMDYAALHRLFRLQSLQTMHVISTFDREKISVKGLKQMRHFRCHSTEHLLVNERVKHRMENVQTLFFVSADSQLGILLNNGCFPNLRTLGLVISEDEGHLVDVNLRSLHRLSELRKLKLEFDISVRVPLGNITFPSNLSKIVLTWCNGLEYQDMNALGRIRRLQILKLYEVGCSQKVLNCGSAGSFPQLQVFIMIFVNVTCVTLEDGAMPRLRRAVFRECPGLMLQSLPEQMLSLDSNLHFIEYKEERRTRRRRTRRRID 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04160 1051 Pfam NB-ARC domain 366 610 IPR002182 GO:0043531
Arst4g04160 1051 Gene3D - 10 180 IPR035897 -
Arst4g04160 1051 Gene3D Ribonuclease Inhibitor 725 1035 IPR032675 -
Arst4g04160 1051 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 336 IPR044974 GO:0006952
Arst4g04160 1051 FunFam Probable disease resistance protein At1g63360 608 704 - -
Arst4g04160 1051 Pfam TIR domain 15 176 IPR000157 GO:0007165
Arst4g04160 1051 ProSiteProfiles TIR domain profile. 14 180 IPR000157 GO:0007165
Arst4g04160 1051 FunFam Probable disease resistance protein At1g61300 351 513 - -
Arst4g04160 1051 Gene3D - 519 607 IPR042197 -
Arst4g04160 1051 Gene3D - 608 704 IPR036388 -
Arst4g04160 1051 PRINTS Disease resistance protein signature 385 400 - -
Arst4g04160 1051 PRINTS Disease resistance protein signature 460 474 - -
Arst4g04160 1051 PRINTS Disease resistance protein signature 555 569 - -
Arst4g04160 1051 SMART till_3 15 154 IPR000157 GO:0007165
Arst4g04160 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 351 IPR027417 -
Arst4g04160 1051 SUPERFAMILY L domain-like 688 1027 - -
Arst4g04160 1051 Gene3D - 356 514 IPR027417 -
Arst4g04160 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 622 IPR027417 -
Arst4g04160 1051 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Arst4g04160 1051 Gene3D - 181 342 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04160 Arst-Chr4 119885580 119889376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04160 16 336 WRKY Transcription Factor Family AT4G12020 25.309 2.20e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04160 - - aip:110271380 1281.16