Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04159 ATGTCAATTCTTATACTGTGTGATGAGTATCCAACCTCCAAGTGGTGCCTTGATGAACTCGTCAAGATCATGGAGTGTTCCCACAACGGAACAAAGCGACCAGTGTTACCAGTTTATTACTATGTGACAAAATCAGATGTGCGGTACCAACTCAATGAATATGCAAAAGCCATGACTGATCATCAAAACAAAGGCAGATACAATCACAAGCTGAAAGCATGGAGGTCAGCCTTGTCCGAAGTAGGCAAGAGTTATGGTCAACGCTGTAATCAGAATACACCATGGGGTATGGCTCTTGACAACATTGTTGAAGAGGTCACAAAAAGACTTCCTCCGATGCCTTTGTGTATTGACCGTCCACTTGGATGTGATTCTGAACTTGAAGAGGCAAAATCACTTCTACAGATTGATTCTCGTGCTACCTGTTTGATGCTGGGAATTCATGGAGATGGTGAACTAAGCAAATTTGTTGCGGAGCTGTATAACAAGATTAGGCCTCACTTTGTAACTGCAAGTTTTCTTTCCAATATCAGTGAGAAAACAAATGAAAGTGGTGGTGGCCTAGAACATCTTCAAGAAACGCTTCTTTCTGAGATGGGAGAGGAAATAAAGACCAAGATCGGAAGCACATTCAAAGGATCCTCTGAGATAAAACAAAGACTAGGCCAGAAAAGAGTTCTTCTAGTTTTGGATGATGTTGATAATATACAACTGAAATCACTAGCTGGAGGAATTGATTGGTTCGGTCCTGGTAGCAGAATCATTATAACAACAAGATATGAAGATGTGCTAGATGAGCATGTTTTAAATAATGGTATTGAGGTTAAGAAATATTGCTATGATGAAGGTGAATTCGATGGCAACAAAGGAAGTTATTCTATGATGGAAGAAAATATAGTCGGATTACAGAAAGACTTTGATGAGGTAATTAATCAACTGAAGGAAGAAGATTCTCCAAGGAATGTTGTTTCCATTGTTGGCATGGGTGCGTTGGGAAAGACTACCCTTGCTCGAAAGATCTATAACAGCAAAGAGGTCAGGAAGCTATTCCCTTGCCGTGCATGGACAACTATTTCAAAAGAATACATGGAAAAAGAAGTTTTTAGAAACCTTCTCAACTCTTTGACTTTACAAAAATCTAAATATAAAAATTCAAGTGAAGAGGAATTGAAGGAGAAGGTGAGGAAATGTTTGAATGGGAAGAAGTATTTGGTAGTGCTTGATGATGTTTGGGAAACAGAAGCGTGGGACAAGTTAAAGGATTATTTACCAGATAACAAGAATGGAAGCATGATACTGATAACTACACGTAAAAATCATGTGGCGTATTATGCAAGGTCAAAGGATCCTCACCACCAACAAAACTTCTTGGATAAAGATCAAAGCTGGGAAATGTTTTGCAACAAGGTGTGA 1413 0.3907 MSILILCDEYPTSKWCLDELVKIMECSHNGTKRPVLPVYYYVTKSDVRYQLNEYAKAMTDHQNKGRYNHKLKAWRSALSEVGKSYGQRCNQNTPWGMALDNIVEEVTKRLPPMPLCIDRPLGCDSELEEAKSLLQIDSRATCLMLGIHGDGELSKFVAELYNKIRPHFVTASFLSNISEKTNESGGGLEHLQETLLSEMGEEIKTKIGSTFKGSSEIKQRLGQKRVLLVLDDVDNIQLKSLAGGIDWFGPGSRIIITTRYEDVLDEHVLNNGIEVKKYCYDEGEFDGNKGSYSMMEENIVGLQKDFDEVINQLKEEDSPRNVVSIVGMGALGKTTLARKIYNSKEVRKLFPCRAWTTISKEYMEKEVFRNLLNSLTLQKSKYKNSSEEELKEKVRKCLNGKKYLVVLDDVWETEAWDKLKDYLPDNKNGSMILITTRKNHVAYYARSKDPHHQQNFLDKDQSWEMFCNKV 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04159 470 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 86 IPR035897 -
Arst4g04159 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 292 469 IPR027417 -
Arst4g04159 470 ProSiteProfiles TIR domain profile. 1 110 IPR000157 GO:0007165
Arst4g04159 470 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 299 468 IPR044974 GO:0006952
Arst4g04159 470 Pfam NB-ARC domain 189 269 IPR002182 GO:0043531
Arst4g04159 470 Pfam NB-ARC domain 303 470 IPR002182 GO:0043531
Arst4g04159 470 Pfam TIR domain 2 90 IPR000157 GO:0007165
Arst4g04159 470 FunFam Probable disease resistance protein At1g61300 287 450 - -
Arst4g04159 470 Gene3D - 1 110 IPR035897 -
Arst4g04159 470 Gene3D - 288 449 IPR027417 -
Arst4g04159 470 Gene3D - 111 271 IPR027417 -
Arst4g04159 470 PRINTS Disease resistance protein signature 322 337 - -
Arst4g04159 470 PRINTS Disease resistance protein signature 397 411 - -
Arst4g04159 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 281 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04159 Arst-Chr4 119870583 119872866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04159 12 276 WRKY Transcription Factor Family AT4G12020 27.407 2.39e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04159 - - adu:107486175 961.059