Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04156 ATGTCATATGATGGAGCCGCCGAGGCGTCGTCTTCGTCATTGCCGCCGGCACCGTGGGTGTGGGCGACGTCATCCATATCAGAAGGCATGTATGATGTTTTTCTGAACTTTAGAGGCGAGGATTCTAGGTTCGCATTCACAGATTATCTCTATCATGGATTGGCCGACGTAAAAAAACTGCAAGTATTCAGAGATGATCCGGGTCTGCAACTAGGTGACAAAATCACAATTCTGATGGAAGCAATTAAAAGATCAAGGATTCATATTGTTGTGATGAGTGAAAACTATGTATCTTCCCGATGGTGCCTCCTGGAACTACAGCAGATGCTCAAGTTATCCGACGATGGAAAGAAACGGCCCGTTATCCCAATTTTTTTATACGTGGAGCCGTCAGAAGTGAGATTTAGCGACAAATCCAAGGAAGCCATGGAGAAACATGAAAAGAGATACGGCAAAGACACGGCGGACGCGTGGACATCCGCTCTAAATGAAGTTTGCAGCCGCAGCGGAGAACACACTTTTCCTGTTCCCAAAACGCAGAAGTATGAAACAGAGGTCATAGGCAAGATTGTTGAACAAGTCTCTGCAACACTTCAACAGATCAAGCAACAATTAAATAGATTTGATTCTCAATTTGAAGTGGTTGAATCACTTTTGAACCTTGAATCTTGTGATACTGTTGGGGTGGTGGGAATTTATGAGGATCCTAAAATAGGCAAAAGTTACATAACAACATTTGCTTTTGAGCTATACTATAAGATCAAACATAACTTCCAAGCGGCAGGTTTTCTTGTTGATGTTAGTAAATTTCTAAGTAAAACTACTGACAATCACTTGGCAAATCTCCAAAAGGAGCTTCTTTCTGATATGGATGTGAAGACTATGCAGGAGTTGGAGAATAAAAAGATGCTTCTGGTTCTGGAAGGGGTTGATAGTAAAGAGCATTTGGAGTTGCTAGTGGGAATGGGAATAAGTGATTGGTTTGGTGGTGGTAGTAGGATCCTCATAGCAACAGAAAACAGAAATCTCTTTGCGGATTGTCCTCCTGAGATGAATGGTGTTAAGCTTGAGAAACATTGCATACGCAAAGGTGAATTGGTGAAGGAAAAGATTGTGAAGGAGAAGAAGGTAGTGGGATTTGTGAAAGAATTCTTCGATGTTATTAATCAACTGACGAAAGAAGATTCAAATAGGAGGAATGTTGTTTCAATTGTCGGCATGGGCGGGTCGGGCAAGACTACTCTTGCCCGAATGATCTATGGCAACAATGAGGTGAGGAAGGTATTCCCTTGCCGTGCGTGGGCAACTGTTTCCAAACAGTGCATTGAAAAGGAAGTTTACAGAAAGCTTCTCAAGTCTTTGAAGGTACCAAAATCTGAATATGAGAAATTAAGTAAAGAGGAGTTGAAGAAGGAGGTGAGAAAACGTTTGAATGGGCGAAGGAGAAAGTATTTGATAGTGCTGGATGATGTGTGGGACACTGAGGCGTGGAACAAGTTGGAATATCTTCTCCCAGAAAAGAATAATGGGAGCAGGATATTGATGACTACGCGAAATGATAGGGTGGCAAACTATGCAAAGTCAAAGGAACCTCACAATAAACTTGAGCGTTTGAAAGAAGAAGAAAGTTGGGAATTGTTCCGTAGCGAGGTGTTTGGTGGAGAAAAGTGTCCTGATTTAGAGCCTATTGGTAAATCAATTGCCAAAAGTTGCAAGGGTTTGCCATTGGCTATCGTAACCATAGCAGGGGTTGTCAAAAAGAGGAACAGATCAAAAACAGAGTGGGAAAGTATTGAGAAATTAATTCCTCATTGGTGCGATGATGAGGATATCAAGAGGATGAAGAAGATATTGCAGATGAGCTATGATGATTTACTTCCAGAATTGAAGCCATGCTTTCTATATCTTGGGGTGTTTCCGGAAGATTGCATGATTGCAGCAAAGGCGTTAATTGAGCTATGGAATGCAGAAGGCTTGACAAAAGTAGGAGAAACTGGAAGATCAAATGCACCAGAGCCTGAAGACACTGGTGAGGAGCGCTTGAAGGAGCTAGTGGATCGTAACTTGGTACAAGTGGTGAGTAGGAAGAGTGATGGGGAAGGCGTGAAAACATGTCGGATCCACGATCTCTTCCGGGAACTGTGCATATCACTGAGTAACGAACCAGATAACAACAACAATGATCGTAGATTATTGTCCTTTCCCAGAAACGTAGGATCCTACTATGCCTGTTCAGTAGAGACATGTAATGAATCACCAACTCTTTCACTATTCTTTTATGGAAATGCAGAGGGGTGGGCCCAACATATTTCAGAAAACCGCCGTGTTAAGGTGCTGTATTTTTCTCGATGGGTAAGTAATAGTTCAAGAAGTGTTAAGTATTTGAAGAGTTTGAGTTTGACATCCGACCTCAAGTACTTGAGAATGGACTTTTCCGACTCATATGGGTTGCGTAACTTTCCAAGCTTAGAAACATTACATATACTGCACGACGGTTGGGCGATTAACCTAAGCATTGGGGGCTTAAAGAAACTGAGACATCTTTATAGTCAATGTCAGCTGGATTTATTAGGAGTTAAAGATAAAATGCAGAATCTTCAAACTCTATGTCGTGTGACTGCCGATTCACATCTATGGTCCTTTCTCCACAGTGGCTACTTCCCCAACTTGAGAAAGCTGGGTTTAATTTTAACTAAAATAGACCCAGAAAGTTCAGCAGAGAAAAACTTAAAGAGCCTGCGTGGCCTAAGCGAGCTACGTAAGCTGAAACTTAAGTTTGTTCACTTTAGTGGAGTTTCATTAGATAATGCACTTCCGTCAAGTCTTATCAAGATTACCTTGTCAGCGTTTACGGGTTTGAAATCCGAGGACATGAATACCTTGGGACTAATGCCCAAGCTTCAAATTTTAAAATTGACTTGGGGACATTGTGCCGAAGAAACTCTTGATATTGGTAGTGCTGGGAGCTTTCCGTGTCTTGAAGTGTTAATCATGAGACATGTGACAAGTGTCGCATATCTTAAATCAGGACAAGGTGCGATGCCTCATCTTCGACGTGCGGTCTTCTTATACTGCACTGACTTGAAGGAGGTCACTCAACGAATGCGTTCCTTGGGTAGTAACTTGGAATTTGTAAACGACTGA 3144 0.4202 MSYDGAAEASSSSLPPAPWVWATSSISEGMYDVFLNFRGEDSRFAFTDYLYHGLADVKKLQVFRDDPGLQLGDKITILMEAIKRSRIHIVVMSENYVSSRWCLLELQQMLKLSDDGKKRPVIPIFLYVEPSEVRFSDKSKEAMEKHEKRYGKDTADAWTSALNEVCSRSGEHTFPVPKTQKYETEVIGKIVEQVSATLQQIKQQLNRFDSQFEVVESLLNLESCDTVGVVGIYEDPKIGKSYITTFAFELYYKIKHNFQAAGFLVDVSKFLSKTTDNHLANLQKELLSDMDVKTMQELENKKMLLVLEGVDSKEHLELLVGMGISDWFGGGSRILIATENRNLFADCPPEMNGVKLEKHCIRKGELVKEKIVKEKKVVGFVKEFFDVINQLTKEDSNRRNVVSIVGMGGSGKTTLARMIYGNNEVRKVFPCRAWATVSKQCIEKEVYRKLLKSLKVPKSEYEKLSKEELKKEVRKRLNGRRRKYLIVLDDVWDTEAWNKLEYLLPEKNNGSRILMTTRNDRVANYAKSKEPHNKLERLKEEESWELFRSEVFGGEKCPDLEPIGKSIAKSCKGLPLAIVTIAGVVKKRNRSKTEWESIEKLIPHWCDDEDIKRMKKILQMSYDDLLPELKPCFLYLGVFPEDCMIAAKALIELWNAEGLTKVGETGRSNAPEPEDTGEERLKELVDRNLVQVVSRKSDGEGVKTCRIHDLFRELCISLSNEPDNNNNDRRLLSFPRNVGSYYACSVETCNESPTLSLFFYGNAEGWAQHISENRRVKVLYFSRWVSNSSRSVKYLKSLSLTSDLKYLRMDFSDSYGLRNFPSLETLHILHDGWAINLSIGGLKKLRHLYSQCQLDLLGVKDKMQNLQTLCRVTADSHLWSFLHSGYFPNLRKLGLILTKIDPESSAEKNLKSLRGLSELRKLKLKFVHFSGVSLDNALPSSLIKITLSAFTGLKSEDMNTLGLMPKLQILKLTWGHCAEETLDIGSAGSFPCLEVLIMRHVTSVAYLKSGQGAMPHLRRAVFLYCTDLKEVTQRMRSLGSNLEFVND 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04156 1047 PANTHER DISEASE RESISTANCE PROTEIN RP 369 998 IPR044974 GO:0006952
Arst4g04156 1047 Gene3D - 537 621 IPR042197 -
Arst4g04156 1047 Gene3D - 358 532 IPR027417 -
Arst4g04156 1047 FunFam Probable disease resistance protein At1g63360 622 717 - -
Arst4g04156 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 636 IPR027417 -
Arst4g04156 1047 Coils Coil 191 211 - -
Arst4g04156 1047 Gene3D - 28 195 IPR035897 -
Arst4g04156 1047 Pfam TIR domain 31 209 IPR000157 GO:0007165
Arst4g04156 1047 SUPERFAMILY L domain-like 706 1032 - -
Arst4g04156 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 347 IPR027417 -
Arst4g04156 1047 ProSiteProfiles TIR domain profile. 29 198 IPR000157 GO:0007165
Arst4g04156 1047 Pfam NB-ARC domain 386 624 IPR002182 GO:0043531
Arst4g04156 1047 FunFam Probable disease resistance protein At1g61300 362 531 - -
Arst4g04156 1047 Gene3D - 196 356 IPR027417 -
Arst4g04156 1047 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 169 IPR035897 -
Arst4g04156 1047 PRINTS Disease resistance protein signature 571 585 - -
Arst4g04156 1047 PRINTS Disease resistance protein signature 401 416 - -
Arst4g04156 1047 PRINTS Disease resistance protein signature 478 492 - -
Arst4g04156 1047 SMART till_3 30 168 IPR000157 GO:0007165
Arst4g04156 1047 Gene3D - 622 717 IPR036388 -
Arst4g04156 1047 Gene3D Ribonuclease Inhibitor 767 1045 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04156 Arst-Chr4 119843900 119864023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04156 79 347 WRKY Transcription Factor Family AT4G12020 29.537 7.22e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04156 - - aip:107637424 1632.46