Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04149 ATGGCTAGGTCGTTCCTCCAAGTGGCTGCTACCGAGGAGGCTGCTCCGCCTCTCAGAGTCGTCCAGATGGAAGGGCTGGTTATCCTGAAGATAATTAAGCATTGTAAGGACCACTCACCTTCTCTAGTCACTGGACAGCTTCTTGGGCTGGATGTTGGCAGTGTTCTTGAAGTTACTAACTGCTTTCCCTTTCCGATGAGGGAGGAGGATGAAGAAATTGAAGCTGATGGTGCAAATTACCAGCTTGAGATGATGAGGTGCCTGAGGGAGGTGAATGTTGACAACAATACCGTTGGATGGTACCAATCTACATTGCTTGGCTCATTTCAGACTGTGGAACTGATTGAAACCTTCATGAATTACCAGGAGAATATTAGACGCTGTGTTTGCATAATATATGATCCATCAAGGGCTGATCAAGGTGTCCTAGCCCTTAAGGCCTTGAAGCTTTCTGATGCATTCATGGAACTCTATCGCAGCAACAATTTCACTGGAGAAAAGTTGAGGGAGAAGAACTTATCATGGGTGGATATCTTTGAGGAAATACCTATCAAAGTTTCAAATTCTGCCCTTATCAGTGCTTTTATGACAGAACTGGAACCTGATTCTCCGGTTACCCAGTGTGATTATGATCGTCTTCAATTGTCAACCAGTTCATTAATGGAGAGGAACATGGAATTTTTGATTGAATGCATGGATGACTTGTCCCTAGAACAACAAAAGTTCCAATTCTACTATAGGAGCTTGTCGCGTCAGCAGGCTCAACAGCAAGCTTGGCTTCAGAAGAGAAGGGTGGAGAACATGTCACGTAAAGCTGCTGGAGAGGACCCTTTGCCTGAGGAAGATCCTTCAAACCCCATCTTCAAGCCACTCCCTGAACCATCACGGTTGGAGAGCTTCCTCATTACTAATCAAATTTCAAACTACTGCAACCAAATCAATGGGGTGTCAGGGCAGAGTTTTAACAGACTCTATTTGATGAAGGCTTTGCATGAGGAATGA 1002 0.4471 MARSFLQVAATEEAAPPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRADQGVLALKALKLSDAFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDSPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSLEQQKFQFYYRSLSRQQAQQQAWLQKRRVENMSRKAAGEDPLPEEDPSNPIFKPLPEPSRLESFLITNQISNYCNQINGVSGQSFNRLYLMKALHEE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04149 333 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 19 122 IPR000555 GO:0005515|GO:0008233|GO:0008237
Arst4g04149 333 Gene3D Cytidine Deaminase, domain 2 2 209 - -
Arst4g04149 333 MobiDBLite consensus disorder prediction 270 290 - -
Arst4g04149 333 CDD MPN_eIF3h 19 282 IPR027524 GO:0003743|GO:0005737|GO:0005852
Arst4g04149 333 FunFam Eukaryotic translation initiation factor 3 subunit H 1 209 - -
Arst4g04149 333 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 16 333 IPR027524 GO:0003743|GO:0005737|GO:0005852
Arst4g04149 333 ProSiteProfiles MPN domain profile. 21 154 IPR037518 -
Arst4g04149 333 Pfam C-terminal region of eIF3h 140 332 IPR045810 -
Arst4g04149 333 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 13 317 - -
Arst4g04149 333 SMART pad1_6 20 153 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04149 84 332 Eukaryotic Initiation Factors Gene Family AT1G10840 83.936 3.99e-157 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04149 K03247 - gmx:100814297 631.713