Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04115 ATGGCATTCCTTCCACAACCACGTGAATCAGCAGAACCCGAAGATTGCGAAGAAACCATTGTCACAACCGCAACAGCGGCAACTACAGCAAGAGCAATAGCAGCAGCAGAAGAAGATAACGGAACCATCGACGTTCATACAACAAGAGGCGCAACCATAAGGTACCTTCCATTGGATCATCTCTACTCTGCCACGTCACCCTGCAGTGGCTCCTCCAACGTCATGTCCAAGAAAGTTAAGGCTCGCAAGCTCACACCGCATTTTCACCAAAACGACGACGTTAGCGCCAAAACGACGAACTGCAACAACAACGGTGGTGATGATGCTGACAATGTTTCTACTGATAGTTCTGTTGTTGTTGTTCCGCCGAATGATGTTGACAGCAATGATGATAAGCCACCGCTAATTTTTGTTTACTCTCGGCGGCGAAAGAGGGGTGGTTCTGGTTCTACTACTGCGTCGTTTTACAATTCATTATCGGGTCGGGCTGGGAAGGACCCGGCGGAAAGGGTGACTTCGAAGAAGAGGAAGATTGGGACCACCGAGCTGGAGAAATTGGGAGTGGATTTGGGCGCGTTGGGAGTGCTTGACGACGGGCCTAGATTGAGAGAATGCCGCATTAGTAATAACGATGGTGGTGGTGGTGGTGGTGGCGGCGTTTCAGTGGAGAAGTTGGTATCTGAATCTCGTACAGTGAAGAGATGGGTTGGGTTGAGTTTTGATAATGCTGACCCTGAGGCGTTCATTGGATTGCGATGCAAGGTGTTTTGGCCAATGGATATAAAATGGTACGCTGGCCATGTCAAAGGTTATGATATCGAAACTAAGATACACCATGTAAAATATGATGATGGCGAGGAAGAAAATTTAATTCTTTCAAATGAAAATGTGAAATTTCATATCTCCCGCGAGGAGATGAAGCGCTTGAATTTGAATTATGGCAAAGTTCGTGACAGTAATGTCTCTGATTGTGATGTTGAAGAGATGCTTGCGATGGCTGCAAGTTTGAATGATTGTCAACAATTTGAACCTGGAGACATCGTATGGGCTAAGCTAACAGGCCATGCAATGTGGCCAGCTGTTGTTCTGGATGAATCACTTGCACGCAAGTGCAAGGGTTTGAATACATTGGGAGGAAACTCGGTTCCTGTCCAGTTTTTTGGCACCCATGACTTTGCAAGGGTTAGACTGCAGCAGGTGAAATCGTTCCTAAGTGGACTTCTTACTGAGCTATACACAAAGTGCAACAAAACCAGTTTCTTTGACAGTATGGAAGAGGCAAAGAGGTATTTAAATGAACAGAAACTTCCCTCAGAGATGCTAGCGTTGCAAAAAGGATGTACAGCTGATGACTGTAAAAATGTAACTGGAGAGGATGGACAGTGTACAGGTTCAGGAGAAGATTCTTTGAGTGACAAAGAGCCTTCCATAGCACTGGAAAACATTAAATTTCCCTTGGAAGTAGGAGACCTACAAATTATAAGCCTTGGGAAAGTAGTTGAAGATTCTTCATCTTTCTGTGATGGAAAATCCATCTGGCCTGAAGGGTACACTGCAGTGAGGAAGTTTACTTCAGTCACTGATGCTAAAGTATCTGCTGCTTATAAAATGGAGGTCCTGAGAGATCCAGAGTCCAAAGAACGACCTCTATTTAGAGTGACAGTTGATGGTGGTGAGCAGTTCAACAATCATACACCATCAGCTTGCTGGAACCAAATATACCAAAGGATAAATAAATTAGAAAAGGATGGTTCTGAAGCTTCTGTTGCGGAAGATAGGGTAGAAAGCGGATATGAATCTGGGACTGGTATGTTTGGTTTCTCCAATCCTGAAGTAGCTAAACTAATACAGGGATTATCCAAATCCAAAGTTTCTTCAAAGAAATCAAGTTTGAAGTTAGGTTCCAGAAGATATAATGACCTACCTGTTGGTTATAGGCCGGTTCATATTAATTGGTTTGATCTTGATAAGTGCAATGTCTGCCACATGGATGAGGAATACGAGACCAATCTGTTTCTGCAGTGTGACAAATGCAGGATGATGGTACATGCTAGATGCTATGGAGAACTGGAATCTGTTAATGGAGTGCTATGGTTGTGCAACTTATGTCGATCGGGTGATCCTCCACCACCTTGTTGCTTATGTCCACTAATAGGAGGGGCAATGAAGCCTACAACAGATGGCCGATGGGCACATTTGGCTTGTGCTATGTGGATACCTGAGACTTGCTTAGCTGATGTAAAAAAGATGGAACCTATTGATGGTTTGAACAGAATCAGTAAGGACCGCTGGAAGTTGTTATGTAGCATATGTGGTGTATCTTATGGTGCTTGCATCCAATGTTCAAACAATTCTTGCCGAGTAGCATATCATCCACTTTGTGCTCGTGCTGCTGGTCTTTGTGTTGAGCTTGAGAATGAGGACAGGCTCTATCTACTTTCTGTTGATGATGATGAAGAGCAGTGCATTCGACTGCTTTCTTTTTGCAAGAAACATAGGCAGCCATCTAATGAGCATTCTGTTGCCAATGAACGTATTGTTCGAGCTGCGGGTCCATGTTCTGACTATGAACCACCACCCAACCCATCTGGTTGTGCTCGAAGTGAACCATATGATTATTTTGGCCGGAGAGGACGGAAAGAACCTGAAGTTCTTGCAGCTGCATCGTCAAAACGTTTGTTTGTTGAGAACCAACCATACCTAATAGGTGGGTACTGCCAGCATGGGTTGTCTAATGAACTAGAACCTTCTGGCAGAGGAGTCTGCGCCCAAGTACATAGGCTGAGGACCTCTTTGGGTGATGATTCGGGCGACATACTTTCTATTTCAGAGAAGTACAAGTACATGAGGAAAACTTTTCGCAAACGGCTAGCATTTGGGAAATCAAGAATTCATGGATTTGGCATATTTGCAAAGCATCCATATAAAGGTGGAGACATGGTGATTGAATACACTGGTGAACTTGTTAGGCCTCCCATAGCTGACCGGAGAGAGCGCTTCATATACAATTCTTTGGTGGGATTCGGTTTTTGTACCTTCATGTTGGATGAAGAACAAAAGAGTCAGATCTTCAATTTATTGCTCACCTATATAGTTTCTGTTTCTGTGCAGCCGAATTGCTATTCGCGAGTTATTAATGCTAATGGGGATGAGCATATTATAATATTTGCAAAGAGGGACATTAAACAATGGGAAGAGCTTACATATGATTATAGATTTTTCTCAATTGATGAGCGGCTTTCTTGTTACTGTGGTTTCCCAAAATGCCGAGGTATAGTTAATGATACTGAGGCAGAAGAGCGAGCTACTGCACTGTATGCACCTCGGAACGAGTTGATAGATTGGAGAGGAGAATGA 3357 0.4379 MAFLPQPRESAEPEDCEETIVTTATAATTARAIAAAEEDNGTIDVHTTRGATIRYLPLDHLYSATSPCSGSSNVMSKKVKARKLTPHFHQNDDVSAKTTNCNNNGGDDADNVSTDSSVVVVPPNDVDSNDDKPPLIFVYSRRRKRGGSGSTTASFYNSLSGRAGKDPAERVTSKKRKIGTTELEKLGVDLGALGVLDDGPRLRECRISNNDGGGGGGGGVSVEKLVSESRTVKRWVGLSFDNADPEAFIGLRCKVFWPMDIKWYAGHVKGYDIETKIHHVKYDDGEEENLILSNENVKFHISREEMKRLNLNYGKVRDSNVSDCDVEEMLAMAASLNDCQQFEPGDIVWAKLTGHAMWPAVVLDESLARKCKGLNTLGGNSVPVQFFGTHDFARVRLQQVKSFLSGLLTELYTKCNKTSFFDSMEEAKRYLNEQKLPSEMLALQKGCTADDCKNVTGEDGQCTGSGEDSLSDKEPSIALENIKFPLEVGDLQIISLGKVVEDSSSFCDGKSIWPEGYTAVRKFTSVTDAKVSAAYKMEVLRDPESKERPLFRVTVDGGEQFNNHTPSACWNQIYQRINKLEKDGSEASVAEDRVESGYESGTGMFGFSNPEVAKLIQGLSKSKVSSKKSSLKLGSRRYNDLPVGYRPVHINWFDLDKCNVCHMDEEYETNLFLQCDKCRMMVHARCYGELESVNGVLWLCNLCRSGDPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKKMEPIDGLNRISKDRWKLLCSICGVSYGACIQCSNNSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEEQCIRLLSFCKKHRQPSNEHSVANERIVRAAGPCSDYEPPPNPSGCARSEPYDYFGRRGRKEPEVLAAASSKRLFVENQPYLIGGYCQHGLSNELEPSGRGVCAQVHRLRTSLGDDSGDILSISEKYKYMRKTFRKRLAFGKSRIHGFGIFAKHPYKGGDMVIEYTGELVRPPIADRRERFIYNSLVGFGFCTFMLDEEQKSQIFNLLLTYIVSVSVQPNCYSRVINANGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLSCYCGFPKCRGIVNDTEAEERATALYAPRNELIDWRGE 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04115 1118 Pfam F/Y-rich N-terminus 489 539 IPR003888 GO:0005634
Arst4g04115 1118 ProSiteProfiles PWWP domain profile. 344 406 IPR000313 -
Arst4g04115 1118 SUPERFAMILY Tudor/PWWP/MBT 247 290 - -
Arst4g04115 1118 ProSiteProfiles FYR domain FYRN motif profile. 483 542 IPR003888 GO:0005634
Arst4g04115 1118 SUPERFAMILY SET domain 951 1091 IPR046341 -
Arst4g04115 1118 MobiDBLite consensus disorder prediction 86 134 - -
Arst4g04115 1118 SMART set_7 955 1078 IPR001214 GO:0005515
Arst4g04115 1118 Gene3D - 484 621 - -
Arst4g04115 1118 ProSiteProfiles FYR domain FYRC motif profile. 546 632 IPR003889 GO:0005634
Arst4g04115 1118 SMART PHD_3 657 704 IPR001965 -
Arst4g04115 1118 SMART PHD_3 767 833 IPR001965 -
Arst4g04115 1118 Gene3D SET domain 941 1107 IPR046341 -
Arst4g04115 1118 ProSiteProfiles Post-SET domain profile. 1078 1094 IPR003616 -
Arst4g04115 1118 ProSiteProfiles Extended PHD (ePHD) domain profile. 709 833 IPR034732 -
Arst4g04115 1118 Pfam PWWP domain 345 431 IPR000313 -
Arst4g04115 1118 Pfam SET domain 1031 1071 IPR001214 GO:0005515
Arst4g04115 1118 Pfam PHD-finger 669 704 - -
Arst4g04115 1118 SMART fyrn_3 498 542 IPR003888 GO:0005634
Arst4g04115 1118 SMART PWWP_4 342 404 IPR000313 -
Arst4g04115 1118 ProSiteProfiles Zinc finger PHD-type profile. 655 706 IPR019787 -
Arst4g04115 1118 PANTHER PHD FINGER PROTEINS 62 1105 - -
Arst4g04115 1118 SUPERFAMILY FYVE/PHD zinc finger 649 719 IPR011011 -
Arst4g04115 1118 MobiDBLite consensus disorder prediction 91 123 - -
Arst4g04115 1118 Pfam F/Y rich C-terminus 548 623 IPR003889 GO:0005634
Arst4g04115 1118 SUPERFAMILY Tudor/PWWP/MBT 338 437 - -
Arst4g04115 1118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 622 702 IPR013083 -
Arst4g04115 1118 FunFam Histone-lysine N-methyltransferase 707 835 - -
Arst4g04115 1118 Gene3D - 248 298 - -
Arst4g04115 1118 ProSiteProfiles SET domain profile. 955 1072 IPR001214 GO:0005515
Arst4g04115 1118 CDD PWWP_AtATX1-like 343 437 - -
Arst4g04115 1118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 703 835 IPR013083 -
Arst4g04115 1118 ProSitePatterns Zinc finger PHD-type signature. 658 703 IPR019786 -
Arst4g04115 1118 SMART fyrc_3 550 644 IPR003889 GO:0005634
Arst4g04115 1118 Pfam PHD-zinc-finger like domain 711 832 - -
Arst4g04115 1118 CDD Tudor_Agenet_AtEML-like 249 299 - -
Arst4g04115 1118 CDD ePHD_ATX1_2_like 718 832 IPR041956 -
Arst4g04115 1118 Gene3D - 331 441 - -
Arst4g04115 1118 CDD PHD_ATX1_2_like 657 703 IPR042010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04115 Arst-Chr4 119521435 119530281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04115 658 803 C2H2 Transcription Factor Family AT3G14740 40.397 1.67e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst4g04115 zf-HC5HC2H_2 7.2e-33 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04115 - - gmx:100808923 1604.73