Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04108 ATGCTCATTTTGGAGCTTCTAAGATTGAATTTTGGTTGTGCCTGTGTTTGTTCTGCTGAAATGGTTAAAAAAGGCATTAACCCTTGTTCTTTTTCAAGGGTGTTTTTGGCATTCCTTCTTGTGTTCTTGTTAAGCTTGAGCAATAACACTGTTGAATGCCATGGAAGGTTGAGTATTAAGCATATCTCTTCTGAGTCTCCATCATCATCATCATCTAGGCCAACACCAACACCATCATCATCATCACTATACAAGGATGAACCTAAGAAGATTATTCTGAGTATAGTTTTAGGAGCAGTAACTGGACTAGTTGGTTCTGTAATCTTTGCATTTGTGGTTCGTTGTGTTGTTCAGTACCTTAACAGAACACCAATCCTCAAGGGTCCTGTCATATTCTCCCCAAAGATTGCCCCCAAGACGCTCCAATCGGCATTGGCAAAAGACAACCACTTGCTTGGTTCAAGTCCAAATGGGAAATACTACAAAACTGTTCTTGACAATGGCCTCACAGTTGCAGTCAAAAGGTTAACACCCTTTGAGAGCAATTCACCCGAGACTAAGAAAAAATCGGTTAAGAGGCAGATACAGAAGGAGCTCGAGCTTCTCGCCGGATTAAGGCACCGAAACTTGATGAGCTTGAGGGCTTATGTGAGGGAGCCTGATACATTCTTATTGGTTTATGATTATGTATCCACTGGTAACCTTGCTGATGTCATGAATAGAGTTAGGGAGAATGAGTTGCAGCTTAATTGGGAAGTTAGGCTTAAAATCGCAGTTGGTGTTGTGAAGGGTCTTCAATATCTTCACAATTGTGTTCCTCAAGTTCTTCACAACAACTTGAAGCTCACAAATGTGATGCTGGATGCAGAGTTTGAACCTAAATTAGCAGATTATGGATTGGCTAAGCTTCTTCCAAACTTGGATAGAGGGACTAGTAGTCCTCCTGAATGTTTCCATAGTTGCAGCAGGTACACTGACAAAAGCGACATCTTCAGTTTCGGCATGATACTTGGTGTTTTACTAAGTGGAAAGGACCCTACAGATCCATTCTTTGGGGAGCCAGCAAGTATGGGAAGCATGGGGGGTTGGCTAAGGCACTTGCAGCAACAAGGCGATGCGAAAGAGGCTCTGGATAAGAGCATTCTTGGCGAAGAAGGCGAGGAAGACGAGATGCTAATGGCCGTGAGAATCGCCGCCGCATGCCTCTCTGATATGCCTGCAGAGAGGCCTTCTAGTGATGATCTTGTTCTCATGCTAACTCAACTCAACAGTTTTTAA 1278 0.4319 MLILELLRLNFGCACVCSAEMVKKGINPCSFSRVFLAFLLVFLLSLSNNTVECHGRLSIKHISSESPSSSSSRPTPTPSSSSLYKDEPKKIILSIVLGAVTGLVGSVIFAFVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKDNHLLGSSPNGKYYKTVLDNGLTVAVKRLTPFESNSPETKKKSVKRQIQKELELLAGLRHRNLMSLRAYVREPDTFLLVYDYVSTGNLADVMNRVRENELQLNWEVRLKIAVGVVKGLQYLHNCVPQVLHNNLKLTNVMLDAEFEPKLADYGLAKLLPNLDRGTSSPPECFHSCSRYTDKSDIFSFGMILGVLLSGKDPTDPFFGEPASMGSMGGWLRHLQQQGDAKEALDKSILGEEGEEDEMLMAVRIAAACLSDMPAERPSSDDLVLMLTQLNSF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04108 425 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 138 229 - -
Arst4g04108 425 Pfam Protein kinase domain 149 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04108 425 MobiDBLite consensus disorder prediction 62 83 - -
Arst4g04108 425 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Arst4g04108 425 SUPERFAMILY Protein kinase-like (PK-like) 150 419 IPR011009 -
Arst4g04108 425 Gene3D Transferase(Phosphotransferase) domain 1 230 424 - -
Arst4g04108 425 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 45 421 - -
Arst4g04108 425 ProSiteProfiles Protein kinase domain profile. 146 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04108 Arst-Chr4 119458488 119461612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04108 60 422 Receptor kinase-like Gene Family AT2G31880 32.598 1.33e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Arst4g04108 Pkinase 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04108 - - gmx:102664172 604.364