Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04107 ATGCTCATTTTGGAGCTTCTAAGATTGAATTTTGGTTGTGCCTGTGTTTGTTCTGCTGAAATGGTTAAAAAAGGCATTAACCCTTGTTCTTTTTCAAGGGTGTTTTTGGCATTCCTTCTTGTGTTCTTGTTAAGCTTGAGCAATAACACTGTTGAATGCCATGGAAGGTTGAGTATTAAGCATATCTCTTCTGAGTCTCCATCATCATCATCATCTAGGCCAACACCAACACCATCATCATCATCACTATACAAGGATGAACCTAAGAAGATTATTCTGAGTATAGTTTTAGGAGCAGTAACTGGACTAGTTGGTTCTGTAATCTTTGCATTTGTGGTTCGTTGTGTTGTTCAGTACCTTAACAGAACACCAATCCTCAAGGGTCCTGTCATATTCTCCCCAAAGATTGCCCCCAAGACGCTCCAATCGGCATTGGCAAAAGACAACCACTTGCTTGGTTCAAGTCCAAATGGGAAATACTACAAAACTGTTCTTGACAATGGCCTCACAGTTGCAGTCAAAAGGTTAACACCCTTTGAGAGCAATTCACCCGAGACTAAGAAAAAATCGGTTAAGAGGCAGATACAGAAGGAGCTCGAGCTTCTCGCCGGATTAAGGCACCGAAACTTGATGAGCTTGAGGGCTTATGTGAGGGAGCCTGATACATTCTTATTGGTTTATGATTATGTATCCACTGGTAACCTTGCTGATGTCATGAATAGAGTTAGGGAGAATGAGTTGCAGCTTAATTGGGAAGTTAGGCTTAAAATCGCAGTTGGTGTTGTGAAGGGTCTTCAATATCTTCACAATTGTGTTCCTCAAGTTCTTCACAACAACTTGAAGCTCACAAATGTGATGCTGGATGCAGAGTTTGAACCTAAATTAGCAGATTATGGATTGGCTAAGCTTCTTCCAAACTTGGATAGAGGGACTAGTAGTCCTCCTGAATGTTTCCATAGTTGCAGGTACACTGACAAAAGCGACATCTTCAGTTTCGGCATGATACTTGGTGTTTTACTAAGTGGAAAGGACCCTACAGATCCATTCTTTGGGGAGCCAGCAAGTATGGGAAGCATGGGGGGTTGGCTAAGGCACTTGCAGCAACAAGGCGATGCGAAAGAGGCTCTGGATAAGAGCATTCTTGGCGAAGAAGGCGAGGAAGACGAGATGCTAATGGCCGTGAGAATCGCCGCCGCATGCCTCTCTGATATGCCTGCAGAGAGGCCTTCTAGTGATGATCTTGTTCTCATGCTAACTCAACTCAACAGTTTTTAA 1275 0.4314 MLILELLRLNFGCACVCSAEMVKKGINPCSFSRVFLAFLLVFLLSLSNNTVECHGRLSIKHISSESPSSSSSRPTPTPSSSSLYKDEPKKIILSIVLGAVTGLVGSVIFAFVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKDNHLLGSSPNGKYYKTVLDNGLTVAVKRLTPFESNSPETKKKSVKRQIQKELELLAGLRHRNLMSLRAYVREPDTFLLVYDYVSTGNLADVMNRVRENELQLNWEVRLKIAVGVVKGLQYLHNCVPQVLHNNLKLTNVMLDAEFEPKLADYGLAKLLPNLDRGTSSPPECFHSCRYTDKSDIFSFGMILGVLLSGKDPTDPFFGEPASMGSMGGWLRHLQQQGDAKEALDKSILGEEGEEDEMLMAVRIAAACLSDMPAERPSSDDLVLMLTQLNSF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04107 424 Pfam Protein kinase domain 149 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04107 424 ProSiteProfiles Protein kinase domain profile. 146 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04107 424 MobiDBLite consensus disorder prediction 62 83 - -
Arst4g04107 424 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 138 229 - -
Arst4g04107 424 SUPERFAMILY Protein kinase-like (PK-like) 150 418 IPR011009 -
Arst4g04107 424 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Arst4g04107 424 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 45 420 - -
Arst4g04107 424 Gene3D Transferase(Phosphotransferase) domain 1 230 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04107 Arst-Chr4 119458485 119461616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04107 60 421 Receptor kinase-like Gene Family AT2G31880 32.432 1.58e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Arst4g04107 Pkinase 9.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04107 - - gmx:102664172 598.201