Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04101 ATGGATCCAAGAAGGCATGGGAAGCTACCATTATCTTCATCATCAGATGCAAAAGAGAAGAGAGAGGATGATGATGATGCTTCTTATTATGGATCTTCTTGGTGCACACCTGAAGACACTGACATGTCAACCATGGTTTCAGCTCTTGCTCAAGTTATGGCAACTTCCAATAATAATAATAATCAAAACCCTCATCACATGATGCTGCCACAATCAAACCCTTTTCCTCTCTCAAATGAACCTCTTCAACCTACTCACCCTCTTCAAGATCAAGAGGGGGGGACAAATAAGAAGAAGCCACACTACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCAGCAGAAATTAGAGATCCAAACAAAGCAGCAAGAGTCTGGCTTGGAACCTTTGACACCGCTGAAGATGCTGCTTTAGCTTATGATAAAGCCGCTCTCAAATTCAAAGGCAACAAAGCCAAGCTCAATTTCCCTCAAAAACTTGTTCAACCAAACACTACTCAACAGCAACAACCTAATAACAACGACATGCTACAACAACAACTACAAGGTGGTTCTGCCTTTCAATTCAATGGTTCAGCTTCTAATGCTATTCTTCCTGCACTCTATTCACCATCATCATCATTATCCTCAACACACGATCATCAAGTTTTCCCAAACTTGTTTCAGTATGCACAGATTCTTTCAAGTGATGAAGCAAATTTCCCTTATTACACTTCACATCTTTTCAATCAACAACAGCAACAGCAGCAGCAACAATTGCAACAATCTTTGAATTCATCGTCCTATTTCTACAACCAACAACAACAACATGATCATGAAGGAGGACACCATCACCACCAAGATCAGTAG 852 0.4108 MDPRRHGKLPLSSSSDAKEKREDDDDASYYGSSWCTPEDTDMSTMVSALAQVMATSNNNNNQNPHHMMLPQSNPFPLSNEPLQPTHPLQDQEGGTNKKKPHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAALAYDKAALKFKGNKAKLNFPQKLVQPNTTQQQQPNNNDMLQQQLQGGSAFQFNGSASNAILPALYSPSSSLSSTHDHQVFPNLFQYAQILSSDEANFPYYTSHLFNQQQQQQQQQLQQSLNSSSYFYNQQQQHDHEGGHHHHQDQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04101 283 MobiDBLite consensus disorder prediction 56 106 - -
Arst4g04101 283 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Arst4g04101 283 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Arst4g04101 283 SUPERFAMILY DNA-binding domain 101 159 IPR016177 GO:0003677
Arst4g04101 283 MobiDBLite consensus disorder prediction 56 91 - -
Arst4g04101 283 PANTHER DNA-BINDING DOMAIN 62 255 IPR044808 GO:0003700|GO:0009873
Arst4g04101 283 FunFam Ethylene-responsive transcription factor 2 100 159 - -
Arst4g04101 283 Pfam AP2 domain 100 150 IPR001471 GO:0003700|GO:0006355
Arst4g04101 283 SMART rav1_2 101 164 IPR001471 GO:0003700|GO:0006355
Arst4g04101 283 CDD AP2 100 158 IPR001471 GO:0003700|GO:0006355
Arst4g04101 283 ProSiteProfiles AP2/ERF domain profile. 101 158 IPR001471 GO:0003700|GO:0006355
Arst4g04101 283 MobiDBLite consensus disorder prediction 1 28 - -
Arst4g04101 283 Gene3D AP2/ERF domain 101 160 IPR036955 GO:0003700|GO:0006355
Arst4g04101 283 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04101 Arst-Chr4 119415376 119419614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04101 45 243 AP2-EREBP Transcription Factor Family AT5G13330 43.069 1.61e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst4g04101 AP2 4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04101 - - gmx:100796624 225.713