Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04079 ATGACAGGTGTTAAAGTGATTTCAACGAGCACAATCCATGTAGCAAACAAGGATTCAACGGTGGAGGAGGAGATTCGGTTAACTCCATGGGATCTCCAATTCCTCCTATTTGTTCCCATTCAAAAAGGTCTTCTCTTCCGTAACAACCCCATCACTACTCCACCAACCATAATAATCCAACACCTCAAACATTCCCTTTCGTCCACCCTTTCTTTCTTCCCACCCCTCGCGGGCCGCCTTTCCGTTACGGAACACGATGACAACACTTCCTCCGTTTCCGTTATTTGCAACAACTCCGGAGCACTGTTTGTCCATGCCGTTGCAGATGAATACTCCGTTAATGATATCGTTAGTTCGGTTTACACTCCACGCTTTGTGTACTCTTTGTTCCCGCTCAACAGGGTTAGGAACCACGAAGGAATAACCAAGCCGTTGTTGGCGGTTCAAGTCACCGAGCTCAATGACGGTTTCTTCGTTGGGTGCACCATGAACCACGTTGTTGGAGACGGAACTTCCTTTTGGCATTTCATGAACTCTTGGGCCGAGATCTCACGTGGTTCGGAAGAATTGTCCAAGCCTCCCGTGCTTGAACGCTGGTTCGTTGACAGCTCCGCCTCTGCCATACGCGTTCCTTTGACGAAGGAGAAGATGATACAAAGTGGTTACGACGGTTTCGTCCCAGAACCTCAATGCGAGAGGGTTTTCCATTTCAGTAAAGACAAGATCGCTGAACTCAAGGCAAAAGCCAACGCAGAAATTGAAGGCAAAAGCAAAAACAAAATATCTTCGCTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTCGGAGCCAGGGTCTTGAGCCCGAAGAAGAAGTGAATTACGGCTTGACGATGGGTGGCAGGGGGAGAATAAAGAGTCCGGCAGTGGCGGAAAACTATTTTGGAAATGCAGTGCAGGTTGGAATAGTGCGCATGAAGGTTAAAGAGCTTCTAGGAGGAGGGCTTGGAAAGGGTGCGTTGGAGATGAACAAGATAGTTGGTTTGCACACGGAGGAGAAGATGAAGAGCTACTATAAGGGTTGGGCGGAGAACCCTAGGTTTCTGACGATGCGAGGTTTGGAGGGCAACAATGCTGTAGTGACAAGCAGTTCGCCAAGGTTTGATGTTTATGGGAATGATTTCGGGTGGGGGAAACCGGTGGCGGTGAGAAGCGGAGCCGTGAACAAGAGCCATGGTAAGATAACGGTTTATGCTGGAGCGGAAGATGGTGTTGACATTGAGGTTTGTCTTTCCTATGAGATATTGGAAGCTATGGGTAATGACCCTGGATTCATGGATGCCGTCTCTCGCTCCGCCACCTAA 1347 0.49 MTGVKVISTSTIHVANKDSTVEEEIRLTPWDLQFLLFVPIQKGLLFRNNPITTPPTIIIQHLKHSLSSTLSFFPPLAGRLSVTEHDDNTSSVSVICNNSGALFVHAVADEYSVNDIVSSVYTPRFVYSLFPLNRVRNHEGITKPLLAVQVTELNDGFFVGCTMNHVVGDGTSFWHFMNSWAEISRGSEELSKPPVLERWFVDSSASAIRVPLTKEKMIQSGYDGFVPEPQCERVFHFSKDKIAELKAKANAEIEGKSKNKISSLQALLTHLWRSVVRSQGLEPEEEVNYGLTMGGRGRIKSPAVAENYFGNAVQVGIVRMKVKELLGGGLGKGALEMNKIVGLHTEEKMKSYYKGWAENPRFLTMRGLEGNNAVVTSSSPRFDVYGNDFGWGKPVAVRSGAVNKSHGKITVYAGAEDGVDIEVCLSYEILEAMGNDPGFMDAVSRSAT 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04079 448 Pfam Transferase family 4 436 - -
Arst4g04079 448 Gene3D - 220 434 IPR023213 -
Arst4g04079 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 440 - -
Arst4g04079 448 Gene3D - 1 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04079 Arst-Chr4 119212031 119213566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04079 60 428 Monolignol Biosynthesis Gene Families AT5G48930 27.949 7.53e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04079 - - pvy:116114536 480.715