Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04068 ATGGCAGATCATGATGCAGAATCTTCCTCCTCACATTTCATATATGATGTTTTTCTGAGCTTTAGAGGCTTCACCCAGTACGGATTCACGGATCGTCTCTATCATTCTTTGTGTGAGAGAGGAATCACCACCTTCAGAGATGATGAGAACCTCAATGAACTTGTCCAGATCATGAAGTGCTCTGACAAAGGAACAAAACGACCTGTTTTGCCAGTTTTTTATCAAGTGGAACCATCAGATGTGCGGCATCAAAGGAATCAATATGAAAAAGACATGATGAGCCATGAAAACAGATACTGCAATGATTTAAACAAAGTAAAAGAATGGAGGTTAGCTTTGTATGAAGTATGCGGTCTAAGTGGAAAACATTGTGCAGAAAATAGCTATGAAAGTGATGTTATCATGAATATTGTTGAAGAAGTCTCAGCAAAAGTTCCTCCTGAACCACTTTACATTAAGCATCCAATTGATTTTGGTTCTCAATTTGAAGTGGTGGAATCACTTTTGGACACTAAATCTCATGATACTCTCTGCATGCTGATTCTTTATGGAGATGTTGAAACAAAGAAAACCACATTTGCAGGGGAGCTGTACAACAAGATAAAGCATCAATTTCAAGCTGCAAGTTTTCTTGATAAAGTACGTATAAAATCAAGGGGGATCCCCAATGGCCTAGAAAATCTCCAAGAGACACTTTCATCAGGTATGTGTGTGCATAAGAAACCAAGAATAGGCAGCACATTAAAAGGATCTTCTGACATAAAACAAAGTCTGCACAATGAAAGAGTTCTTCTGGTTCTAGATGATGTTGATAGTATAGAACAATTGGACTCACTTGCAGGAGGAAGTGATTGGTTTGGTCTTGGTAGTAGAATCATTATAACAACAAGAGATGTAAATGTGCTAGATAAGTATGAGTTGAATGGTGTTAAGGTTATGAAATATTGCATTGATGAAGGTGAATTTAAAGGCATGGAAGGTGCAAAATCAAATCACGAACAAGATAAGGACCTCCAGGAAGATATAGTGGGCTTTGTAGAGATCTTCAATGAAATAGTTAAGAAATTGAAGGAAAATGAGTCATGCACTGAAGTTGTCTCCATAATCGGCATGGGTGGGTTGGGTAAGACAGCCCATGCTCGAAAAATTTATAACAATAATGAGGTGAAAAAGTTATTTTCTTGTTGTGGATGGGTTACTATTTCTAAAGACTACAAAGCTAAGGACGTTCTCACAAGCCTTGTCAATGGTTGGGGATTGTCCAAGTCTACTGAATACAAAGTCTTAAGTAAGAAGGAACAAAAGAGCAAGGTCCAAGAATACTTGGACAGGAAGAAGTATCTGATAGGGCTTGATGACTTATGGGAACCTGAAATCTGGGATGAGGTAGAAAGTTTATTTCCAAATAACAAAAGTGGCAATACAGTACTGATAACTAGTCGTAATGATGAGGTGGCAAATTATACAAGGTCAAAGTCCTACTACCCTCCATTCCTAGACAAAAATGAAGGCTGGAAACTTTTCTGCAAGAAGGTGTTTGGGACACAACAGTGTCCTCCTGTTCTCCAACCCATCGAAAGAGCAATGGTGGAAAAATGTGGGTTTTTACCTTTAGCAATTGTGACCTTAGCTGGGATTGTCGCCAAGAAGAAGAGACTAACACTTGAGTGGATGAGAATCATGCGCAATGTCATTTTGTATCTTGCTAAGGATAATAATAGAGTCATGAATGTGCTAAAGCTAAGCTATGATAACTTGCCTCAAAGATTGAAACCTTGCTTTCTATATTTTGCAGTGTTTCCTGAAGATTATGGAATTCCTGCGAAACAGTTGATTCAACTATGGATAGCCGAAGGATTAATCCAACCACCAAAATCTGGAACATTATCTTCAGGAAAACTAGAAGATATGGCTGAAGAATACCTGAATGAGTTGGTGGATCGTAGCTTGGTGTTGGTAGCAAGAAAAAGGAGTAATGGAAGTCTGTCAGTTTGCCGGATCCACGACCTTCTCCGTGATCTCTGCATATTGGAGAGTAAAGCTGATAACGAGTTTGAGATTTGCACAGAGAGAGGCATGCATTCCATGGACATGAAGACATTTTGTAGATTGTCCCTTTGA 2121 0.388 MADHDAESSSSHFIYDVFLSFRGFTQYGFTDRLYHSLCERGITTFRDDENLNELVQIMKCSDKGTKRPVLPVFYQVEPSDVRHQRNQYEKDMMSHENRYCNDLNKVKEWRLALYEVCGLSGKHCAENSYESDVIMNIVEEVSAKVPPEPLYIKHPIDFGSQFEVVESLLDTKSHDTLCMLILYGDVETKKTTFAGELYNKIKHQFQAASFLDKVRIKSRGIPNGLENLQETLSSGMCVHKKPRIGSTLKGSSDIKQSLHNERVLLVLDDVDSIEQLDSLAGGSDWFGLGSRIIITTRDVNVLDKYELNGVKVMKYCIDEGEFKGMEGAKSNHEQDKDLQEDIVGFVEIFNEIVKKLKENESCTEVVSIIGMGGLGKTAHARKIYNNNEVKKLFSCCGWVTISKDYKAKDVLTSLVNGWGLSKSTEYKVLSKKEQKSKVQEYLDRKKYLIGLDDLWEPEIWDEVESLFPNNKSGNTVLITSRNDEVANYTRSKSYYPPFLDKNEGWKLFCKKVFGTQQCPPVLQPIERAMVEKCGFLPLAIVTLAGIVAKKKRLTLEWMRIMRNVILYLAKDNNRVMNVLKLSYDNLPQRLKPCFLYFAVFPEDYGIPAKQLIQLWIAEGLIQPPKSGTLSSGKLEDMAEEYLNELVDRSLVLVARKRSNGSLSVCRIHDLLRDLCILESKADNEFEICTERGMHSMDMKTFCRLSL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04068 706 PRINTS Disease resistance protein signature 365 380 - -
Arst4g04068 706 PRINTS Disease resistance protein signature 441 455 - -
Arst4g04068 706 PRINTS Disease resistance protein signature 533 547 - -
Arst4g04068 706 Gene3D - 498 587 IPR042197 -
Arst4g04068 706 Gene3D - 1 50 IPR035897 -
Arst4g04068 706 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 121 IPR035897 -
Arst4g04068 706 FunFam Probable disease resistance protein At1g63360 583 677 - -
Arst4g04068 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 310 IPR027417 -
Arst4g04068 706 PANTHER DISEASE RESISTANCE PROTEIN RP 145 356 IPR044974 GO:0006952
Arst4g04068 706 Pfam TIR domain 49 145 IPR000157 GO:0007165
Arst4g04068 706 FunFam Probable disease resistance protein At1g61300 326 493 - -
Arst4g04068 706 ProSiteProfiles TIR domain profile. 1 145 IPR000157 GO:0007165
Arst4g04068 706 Gene3D - 51 141 IPR035897 -
Arst4g04068 706 Gene3D - 329 494 IPR027417 -
Arst4g04068 706 SMART till_3 14 119 IPR000157 GO:0007165
Arst4g04068 706 Gene3D - 142 311 IPR027417 -
Arst4g04068 706 Gene3D - 588 676 IPR036388 -
Arst4g04068 706 Pfam NB-ARC domain 164 307 IPR002182 GO:0043531
Arst4g04068 706 Pfam NB-ARC domain 350 585 IPR002182 GO:0043531
Arst4g04068 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 597 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04068 Arst-Chr4 119124935 119127698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04068 10 302 WRKY Transcription Factor Family AT4G12020 27.900 1.07e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04068 - - ahf:112795437 1230.31