Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04048 ATGTTTCCTTCTAGTTTCGGTAGTTATAGCTCTTACCCTTGTTACCCTTCATCTTCTTCTTCTTCACCATACCCTCCTTTCCCTTTCTTTAACCCTGAAAACAATAATAATGGTGCTAATAATTCAAACAACAACAACAGCAACAACAACAACACTTTCCTTCATGATCCAATTTCTAATAATGCTACTACTACTACTACTGTTATTCCTTACCATCATCATGCTCCAACAATCCCAGAAAGTGCACTGATGACGAATTTGGCAGTGGCTGATGCAATGTTCAAGCAAGAGTACTTCACTGCTGCTGCTGCTGGTGGTTCTTCACACCATCATCATCACCATTATGGCATGTCAAGTTTGATAACAAAGAGGCCAGCACCAAAGAAAGATAGGCACAGCAAGATTCACACTTCTCAGGGCTTGAGGGACAGAAGGGTGAGGCTTTCTATTGAGATTGCACGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGATAAGGCCAGTAACACTCTTGAGTGGCTCCTAACAAAGTCAAAGAGAGCAATTAAGGAGTTAGCTAGAAGCAAGAACAGTAGCAGTGGTAATAACAATGGTGGGGTTGCCAATAACAGCTTCTCTTCTTCCTCTTCTGATGGGGCTGATGATGATGAAGTTGATTCAGTCATCAACCAACAACAACTCACTGATAATATTGATGGTACTCATGAACAAGGGGGTGTGGATTCATTGGAGAGGAGGCTGAGAAGGGATCAACAGAAGGAGGAAGAATCAAGGGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAGCAAGATGTGCAACAGTGAGAAGGTGCAAGACTTGAAGAAGAAAAGCCCTGCAATGGTAATGGAAGAAGATCCTCAGATTCTAATGCAGCATCAACAATTGAGGGCACCAATGATTCAACCTCTTGAGGAATCTTCAATGAGATCATCACCAAAGCTGTTTCAGCCTCATCATCTTGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAAGTAGTGAAGTCCCCAGAGATGATTTCAATGTTATTGAGGAATCCATTGTGATAAGGAGAAAGTTGAAGCAATCTTTGATGTCTTCTTCTTCTTCTTCTTCCAATAATAATCACCATCAAAATCATAATGTTATCCCTAAAGAAGCAACAAACTTCAACAACAACAACAGTGACTACCACTGCTTTCCCAATTTATCATCACCAAATTGGGAAGCTAATGCTTCTGCTGCCACTAATAATGGCCGCTCCAATGTTTGCACAATATCAAGCATGAATCTGTCTACAAGGCTTCAGATCTTTGGAAAGTCTTGGGAAGAGTGCACCAATCCCCACCTATGA 1383 0.4201 MFPSSFGSYSSYPCYPSSSSSSPYPPFPFFNPENNNNGANNSNNNNSNNNNTFLHDPISNNATTTTTVIPYHHHAPTIPESALMTNLAVADAMFKQEYFTAAAAGGSSHHHHHHYGMSSLITKRPAPKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLLTKSKRAIKELARSKNSSSGNNNGGVANNSFSSSSSDGADDDEVDSVINQQQLTDNIDGTHEQGGVDSLERRLRRDQQKEEESRAKMKESREKARARARERTSSKMCNSEKVQDLKKKSPAMVMEEDPQILMQHQQLRAPMIQPLEESSMRSSPKLFQPHHLAAAAGGGGGGGSSEVPRDDFNVIEESIVIRRKLKQSLMSSSSSSSNNNHHQNHNVIPKEATNFNNNNSDYHCFPNLSSPNWEANASAATNNGRSNVCTISSMNLSTRLQIFGKSWEECTNPHL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04048 460 MobiDBLite consensus disorder prediction 187 295 - -
Arst4g04048 460 ProSiteProfiles TCP domain profile. 128 186 IPR017887 -
Arst4g04048 460 MobiDBLite consensus disorder prediction 239 295 - -
Arst4g04048 460 MobiDBLite consensus disorder prediction 220 236 - -
Arst4g04048 460 MobiDBLite consensus disorder prediction 28 55 - -
Arst4g04048 460 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 120 409 IPR005333 GO:0003700
Arst4g04048 460 ProSiteProfiles R domain profile. 263 280 IPR017888 -
Arst4g04048 460 MobiDBLite consensus disorder prediction 31 55 - -
Arst4g04048 460 MobiDBLite consensus disorder prediction 110 141 - -
Arst4g04048 460 Pfam TCP family transcription factor 127 283 IPR017887 -
Arst4g04048 460 MobiDBLite consensus disorder prediction 188 212 - -
Arst4g04048 460 Coils Coil 241 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04048 Arst-Chr4 118986995 118988647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04048 124 290 TCP Transcription Factor Family AT1G67260 42.353 1.59e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst4g04048 TCP 2.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04048 - - aip:107637396 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g04048 4 118986995 118988647 Arst1g04024 1 101954003 101955964 ECH
Arst4g04048 4 118986995 118988647 Arst4g04048 4 118986995 118988647 ECH