Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04042 ATGGGGAGGCCGAAGGAAGAACGTTACTGGAATCAAGTTACAAAACAGGCAGACGGAACGTGGAAGTGCAACCGTTGTGGACGTCAGTTTAGTGGTGGTGTTTCTCGAATTAAAGCTCATGTCGATCGGATCCCGGGGAAAGGTATCTCTATATGCTCTGCTTCACCGGATGATAATCATTTACAACCGCAATCACAAGAAATTGCAAATCGCATGAATCCAGGGGAAGTGGCTGCTGAAGATGATGATCATGAAATGGTTGATGCCTTCTTTGGAGGTTTAATGCAGCATTCAATTAATATTATTAGTCAACCCATCAACTTGCCTGGAGGGTCAGCAGCGGTGGCCCAAAGCAACAATGATGGTTTTGTAAGTGATGAGATTAAAAAGTTAAATGAATTGTTGCATGATTTAACTTTTGAAGAAGACGACATTAAGGGAGAGTTAGAGTGGCTCAAGTCTGAGGGCAAGCAGAGCAAGACACAAGTTGATGATTGGTTGAATGAACTACAAGAATTGAGAAACGAAGTTGGTGATTGCTTGAATCTTGCTATGGTAGCTGTTCATTATTTCAATGAAAACTATCCACACTATCTTGGGCAAATGCAGCAATTAACTGCACAAGTGAGCGAGCTTAAGAAGAAAAAGCCTGTGGTGTTGTCAAATGAATTTGTTGGTAAAGATTTTGAGAAAAATGTTAAGAAGATGTGGGAGCTTGTTGGTGACGAGAAAGTATTGATGATTGGGATACATGGAATGGGAGGGGTGGGTAAAACATGTCTTGCAACTCATATGGAAACTCAAATCATAAGGAAAGGAACTTTCAACCACGTCATTTGGGTCACGGTGTCCCGTGATAATAGCATTTTGAAGCTTCAAGAAGATATCGCCAGAAGAATTGGTGCAAAGCTTAATGGTGATGATGATGAGAGAACAAGAGCAGCACATTTGTCATCCGCGTTATCAGAGAAAGGAAAATGGGTGCTTATTTTGGATGATGTTTGGAAATTCATTGATCTGGAAAAAGTGGGAATCCCTCGTTGTAGAATCAATGGTTCTAAATTGATTACAACAAGTCGGTTGAAACATGTGCTTCGACAGATGGGTTGCCCCAGACTTAATATAATAACAATGGATCTTCTCTCTGACAGTGAAGGTTTGGAGTTATTTCTTGTAAAACTTGGTGAAGATCACAGAACACCTGCTACCTTACCATATAGATATAAGATATTTAAAATTGCAATGTTTATTGCACGGGAATGCAATGGTTTACCTCTTGCAATCAGTGTAATGGCTAGAACCATGAAGGGGATTGATAGCATTCATCAGTGGAGACATGCGTTGAATAAACTTGAGAGGGGGGAGATGGGGGAAGAGATGAAAGAAGAGGTATTTCAAGTATTAAAACTGAGTTATGATAACCTGATGGACACTCGCTTGCAAAATAGTTTCTTGCATTGTGCATTATACTTTGAAATCCTTGACTATGATAAAATGATAATGATGTTGGTTGACAGTGGAGCCATAAACGGAAGGAGGAGTTTGAACGACATTTTTGACGAAGGCCATACCATATTGAATGAACTTGAAGACCATTCATTATTGCCTCGCTTTGGGAATATGCAGAATTCGGTGAAAAATATGGCATGTCATATATTGAAAGAATCTCAAAGGTGCATAGTGAGATGTGGTAAAAAATTGACAGGAATACCCAACATGCAAGAATGGAGTGCTGATTTGGAGTTAGTTTCTTTGGATACAAATGAGATAGAAGAAATCCCAGCGGGTACATCACCCAAGTGTCCAAGGTTATCCACCTTGATTCTCCGTAATAATTGCATCAGTAGCATCCCAGAATGCTTCTTCACACACATGAAATCTCTAGCAATACTTGACCTATCTCAAAATCGCAGTTTAACCTCTCTGCCGGATTCCCTGTCGGACTTGACTTGTCTTGTTTCTCTACTTCTTCATCACTGTTACGCTCTGGCAAAGGTGCCTCCATTGGGAAGGCTTCAAAAATTGTCAAGGTTGGTAATTTCAGACACTCAAGTTGAGGTAGTTCCTGGCTTGGAAATGCTAACAAACTTGACATGGCTTGATCTATCTTACAATGAAAAGTTGAGGTTAGAATCAGGGAGGGTGCTGCGTGGTCTGACCAAATTGCAATATCTGGATCTCTTCAAAGCTGCTCTGCTAAATGTGGAAATAGAGGATGTACAAGGGCTGACCACACTTGAATATTTTGTGGCCGGCTTTAATGACTGCAAAAGCTATGACAATTATGTGGCAAGTATATGGAACACAGGTTCTGCACCCAAATCTTATCTTCTCTATTTGGGTAGTACCGCTAACTCTGAATGGATTTTTGAATCTAAATATGATACTGGTCCACGTTGTGACGACCACCAAATTGTACATTTATTAGATTGCGAAGAATCCCCTCATTTGCTGCCAAAAGATCTTACCAAAATCTTTATTGAATGTAATCCCCGTTGGAAAAGTTTATGTGATGCTCTCTCAAATATTACTCCTTCTTCTTTGGAGAACATTCAAATTGCGAGATGCACAGAAATGAAGAGCGTGCTTTGTTCATTTGGTAATTGTTCCTTTTGCAGTAATCTCAACAACCTTCAATCCTTGCAGCTTTACGGTTTGGAGAGCTTAACAGTCATTTGTAAAGAAGATGTTGCTGTTACTGATACAACAACACAGCCTCTCAAACCAAATGCCGTCTTCTCTCATCTCAGGCACTTAGAGATCTCATCTTGCAATGGGATAGAAACGTTGGTAACAGCAGGGTTATTGCCCCAACTTCAAAACCTGCAGACATTAACTGTGGAGGGTTGTCGATCATTGAGACAAATATTTGCAGCGAGTAGCAGTGGTGCTGATAGTGATGATGCTGCTTCCACCATCATTACACTCCCCAACTTAACCTCACTCTATTTGTGGGACTTGCCAATGTTAGAGACTGTGTGCAAAGGAATTATAATCTCCGAATCATTGCCGAAATTTGTGATCCGTGGGTGTCCCAAGTTAGAAAGTCGGTCTCCATTTGAAGTCTCATCATCATCATTTACTTCTTACACATGA 3096 0.4047 MGRPKEERYWNQVTKQADGTWKCNRCGRQFSGGVSRIKAHVDRIPGKGISICSASPDDNHLQPQSQEIANRMNPGEVAAEDDDHEMVDAFFGGLMQHSINIISQPINLPGGSAAVAQSNNDGFVSDEIKKLNELLHDLTFEEDDIKGELEWLKSEGKQSKTQVDDWLNELQELRNEVGDCLNLAMVAVHYFNENYPHYLGQMQQLTAQVSELKKKKPVVLSNEFVGKDFEKNVKKMWELVGDEKVLMIGIHGMGGVGKTCLATHMETQIIRKGTFNHVIWVTVSRDNSILKLQEDIARRIGAKLNGDDDERTRAAHLSSALSEKGKWVLILDDVWKFIDLEKVGIPRCRINGSKLITTSRLKHVLRQMGCPRLNIITMDLLSDSEGLELFLVKLGEDHRTPATLPYRYKIFKIAMFIARECNGLPLAISVMARTMKGIDSIHQWRHALNKLERGEMGEEMKEEVFQVLKLSYDNLMDTRLQNSFLHCALYFEILDYDKMIMMLVDSGAINGRRSLNDIFDEGHTILNELEDHSLLPRFGNMQNSVKNMACHILKESQRCIVRCGKKLTGIPNMQEWSADLELVSLDTNEIEEIPAGTSPKCPRLSTLILRNNCISSIPECFFTHMKSLAILDLSQNRSLTSLPDSLSDLTCLVSLLLHHCYALAKVPPLGRLQKLSRLVISDTQVEVVPGLEMLTNLTWLDLSYNEKLRLESGRVLRGLTKLQYLDLFKAALLNVEIEDVQGLTTLEYFVAGFNDCKSYDNYVASIWNTGSAPKSYLLYLGSTANSEWIFESKYDTGPRCDDHQIVHLLDCEESPHLLPKDLTKIFIECNPRWKSLCDALSNITPSSLENIQIARCTEMKSVLCSFGNCSFCSNLNNLQSLQLYGLESLTVICKEDVAVTDTTTQPLKPNAVFSHLRHLEISSCNGIETLVTAGLLPQLQNLQTLTVEGCRSLRQIFAASSSGADSDDAASTIITLPNLTSLYLWDLPMLETVCKGIIISESLPKFVIRGCPKLESRSPFEVSSSSFTSYT 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04042 1031 Pfam NB-ARC domain 232 474 IPR002182 GO:0043531
Arst4g04042 1031 SUPERFAMILY L domain-like 556 1018 - -
Arst4g04042 1031 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 130 1016 - -
Arst4g04042 1031 Gene3D Ribonuclease Inhibitor 547 787 IPR032675 -
Arst4g04042 1031 Gene3D - 203 376 IPR027417 -
Arst4g04042 1031 Coils Coil 156 183 - -
Arst4g04042 1031 ProSiteProfiles Leucine-rich repeat profile. 603 624 IPR001611 GO:0005515
Arst4g04042 1031 Gene3D Ribonuclease Inhibitor 870 1026 IPR032675 -
Arst4g04042 1031 Gene3D - 380 476 IPR042197 -
Arst4g04042 1031 PRINTS Disease resistance protein signature 321 335 - -
Arst4g04042 1031 PRINTS Disease resistance protein signature 421 435 - -
Arst4g04042 1031 PRINTS Disease resistance protein signature 623 639 - -
Arst4g04042 1031 PRINTS Disease resistance protein signature 247 262 - -
Arst4g04042 1031 Pfam Leucine rich repeat 602 660 IPR001611 GO:0005515
Arst4g04042 1031 FunFam Probable disease resistance protein At1g61300 206 372 - -
Arst4g04042 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 487 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04042 Arst-Chr4 118935862 118955315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04042 248 507 WRKY Transcription Factor Family AT5G45050 27.068 5.36e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04042 - - adu:107486502 1956.03