Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04030 ATGGCGCTGCACGCCCTCACCCTACTACTGTGCACCTTCACACTCTCACTCTCCTTTGCTGTAGCTTCGTCCCACATGGCTTCTTCTTCTTCTTCCTCTTGTTCCGTTGTCACGCCATCCACTCCTCTTGTTTCCTTCCTCGAACAGCTCCAAGAAACGGCGCTCCAAACCTTCGGGGATTCCAACTTCGATCCCAAAACCTACGTTGACTTGCCCCTCAAGTTCACCCTCTCCGAGACACACCAAGCATTCCAGAACCTTCCAAGACTGAGTTCCAACGGGACCGTTTCTGCGGAGGTGCTGAAAGGATTCATCAATAGGTACTTTAAGGGCGCAGGGGATGATCTGGTGTGCTGGCAGCCACATGATTTCGTTGCAGAGCCAGAAGGGTTCTTGACGAAGGTGAAGCACCCGGAGGTGAGGGCGTGGGCTTTGAAGGTTCATTCGCTTTGGAGAAACTTGAGTCGCAAGGTATCCCGTGAAGTCGAAAAGAACCCGCAGCTGCACACTCTGCTTCCCCTGCCGAATCCTGTTGTTATTCCTGGTTCACGCTTTCGTGAGGTCTATTATTGGGACTCCTATTGGGTCATTCGGGGCTTGCTGGTGAGTAAAATGCATAAGACTGCTACTGCTATTGTGATGAATCTTGTTTCTTTGATAGAAAAATATGGATTTGTGCTCAATGGGGCTAGACAGTACTACACTAACAGGAGTCAGCCTCCTCTTTTAAGCTCTATGCTTTATGAGATATACCGCAGCACTGGTGACATTGAGTTAGTTAAAAGATGTTTACCTGCACTGCTTAAGGAGCATGCCTTTTGGAATTCAGATATACATAGAGTGACCATTGTGGATGCTCAAGGACACTCCCATAACTTGAATCGCTATCAGGCAATGTGGAACAAACCCAGGCCAGAGTCGTCCACAATGGACAAGAAATCTGCTTCCAAGTTCTTAAATATTTCAGAAAAGCAGCATTTTTACTGTGATATTGCCTCGGCTGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGAGTTCCACCTGACTACAGTACACTAGCTACAACATCTGTAATACCTGTTGATTTGAATGCATATCTGCTTGGGATGGAAATTAATATTGCCTTCTTTGCAAAAGCTATTGGAGACGAAACCACTGTGAAACACTTCATGGAACTTTCTGATGCTAGAAAGAAGGCAATAAATTCTGTTTTCTGGAGTCCAAGCAAGAAGCAATGGCTCGATTACTGGCTCAACAGTGGCACATGTGAGGTGGCTCATGTTTGGGAAGCTAAGCATCAGAATAAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGGAGCCATTTTACTCAGATGGTTCGCTTGTGGGTAACGTTGTTCATGCTCTCAAAACTTCTGGCCTGATTCGTGCTGCTGGAATTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAATGGTTGGGCTCCACTTCAACACATGCTAGCAGAAGGCCTGGTAAAATCAGGGTCAAAAGAAGCAAGGTTGTTGGCTGAGGAAATTGCTATCAAATGGATTAGAAGCAATTATGTTAGTTACAAGAAAACAGGGGTAATGCATGAAAAGCTTGACGTGGAGAAGTGTGGAGAATATGGAGGCGGGGGTGAATATGCACCCCAGACTGGATTTGGTTGGTCTAACGGGGTTGTGTTGGCATTCTTGGAGGAGTTTGGTTGGCCTCAAGATCGGAGTATAGATTGCTGA 1764 0.4603 MALHALTLLLCTFTLSLSFAVASSHMASSSSSSCSVVTPSTPLVSFLEQLQETALQTFGDSNFDPKTYVDLPLKFTLSETHQAFQNLPRLSSNGTVSAEVLKGFINRYFKGAGDDLVCWQPHDFVAEPEGFLTKVKHPEVRAWALKVHSLWRNLSRKVSREVEKNPQLHTLLPLPNPVVIPGSRFREVYYWDSYWVIRGLLVSKMHKTATAIVMNLVSLIEKYGFVLNGARQYYTNRSQPPLLSSMLYEIYRSTGDIELVKRCLPALLKEHAFWNSDIHRVTIVDAQGHSHNLNRYQAMWNKPRPESSTMDKKSASKFLNISEKQHFYCDIASAAESGWDFSTRWMRVPPDYSTLATTSVIPVDLNAYLLGMEINIAFFAKAIGDETTVKHFMELSDARKKAINSVFWSPSKKQWLDYWLNSGTCEVAHVWEAKHQNKNVFASNFVPLWMEPFYSDGSLVGNVVHALKTSGLIRAAGIATSLTDSGQQWDFPNGWAPLQHMLAEGLVKSGSKEARLLAEEIAIKWIRSNYVSYKKTGVMHEKLDVEKCGEYGGGGEYAPQTGFGWSNGVVLAFLEEFGWPQDRSIDC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04030 587 Pfam Trehalase 62 578 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 ProSitePatterns Trehalase signature 2. 488 497 IPR018232 GO:0004555|GO:0005991
Arst4g04030 587 SUPERFAMILY Six-hairpin glycosidases 58 580 IPR008928 GO:0005975
Arst4g04030 587 PRINTS Glycosyl hydrolase family 37 signature 223 241 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 PRINTS Glycosyl hydrolase family 37 signature 403 419 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 PRINTS Glycosyl hydrolase family 37 signature 481 497 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 PRINTS Glycosyl hydrolase family 37 signature 360 377 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 PRINTS Glycosyl hydrolase family 37 signature 293 310 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 PRINTS Glycosyl hydrolase family 37 signature 561 574 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 PRINTS Glycosyl hydrolase family 37 signature 328 345 IPR001661 GO:0004555|GO:0005991
Arst4g04030 587 Gene3D - 45 585 IPR012341 GO:0005975
Arst4g04030 587 PANTHER TREHALASE 35 585 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04030 Arst-Chr4 118800264 118804217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04030 22 587 Trehalose Biosynthesis Gene Families AT4G24040 57.821 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04030 K01194 - gmx:547539 863.603