Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04029 ATGGCTTCTTCTTCTTCTTCCTCTTGTTCCGTTGTCACGCCATCCACTCCTCTTGTTTCCTTCCTCGAACAGCTCCAAGAAACGGCGCTCCAAACCTTCGGGGATTCCAACTTCGATCCCAAAACCTACGTTGACTTGCCCCTCAAGTTCACCCTCTCCGAGACACACCAAGCATTCCAGAACCTTCCAAGACTGAGTTCCAACGGGACCGTTTCTGCGGAGGTGCTGAAAGGATTCATCAATAGGTACTTTAAGGGCGCAGGGGATGATCTGGTGTGCTGGCAGCCACATGATTTCGTTGCAGAGCCAGAAGGGTTCTTGACGAAGGTGAAGCACCCGGAGGTGAGGGCGTGGGCTTTGAAGGTTCATTCGCTTTGGAGAAACTTGAGTCGCAAGGTATCCCGTGAAGTCGAAAAGAACCCGCAGCTGCACACTCTGCTTCCCCTGCCGAATCCTGTTGTTATTCCTGGTTCACGCTTTCGTGAGGTCTATTATTGGGACTCCTATTGGGTCATTCGGGGCTTGCTGGTGAGTAAAATGCATAAGACTGCTACTGCTATTGTGATGAATCTTGTTTCTTTGATAGAAAAATATGGATTTGTGCTCAATGGGGCTAGACAGTACTACACTAACAGGAGTCAGCCTCCTCTTTTAAGCTCTATGCTTTATGAGATATACCGCAGCACTGGTGACATTGAGTTAGTTAAAAGATGTTTACCTGCACTGCTTAAGGAGCATGCCTTTTGGAATTCAGATATACATAGAGTGACCATTGTGGATGCTCAAGGACACTCCCATAACTTGAATCGCTATCAGGCAATGTGGAACAAACCCAGGCCAGAGTCGTCCACAATGGACAAGAAATCTGCTTCCAAGTTCTTAAATATTTCAGAAAAGCAGCATTTTTACTGTGATATTGCCTCGGCTGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGAGTTCCACCTGACTACAGTACACTAGCTACAACATCTGTAATACCTGTTGATTTGAATGCATATCTGCTTGGGATGGAAATTAATATTGCCTTCTTTGCAAAAGCTATTGGAGACGAAACCACTGTGAAACACTTCATGGAACTTTCTGATGCTAGAAAGAAGGCAATAAATTCTGTTTTCTGGAGTCCAAGCAAGAAGCAATGGCTCGATTACTGGCTCAACAGTGGCACATGTGAGGTGGCTCATGTTTGGGAAGCTAAGCATCAGAATAAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGGAGCCATTTTACTCAGATGGTTCGCTTGTGGGTAACGTTGTTCATGCTCTCAAAACTTCTGGCCTGATTCGTGCTGCTGGAATTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAATGGTTGGGCTCCACTTCAACACATGCTAGCAGAAGGCCTGGTAAAATCAGGGTCAAAAGAAGCAAGGTTGTTGGCTGAGGAAATTGCTATCAAATGGATTAGAAGCAATTATGTTAGTTACAAGAAAACAGGGGTAATGCATGAAAAGCTTGACGTGGAGAAGTGTGGAGAATATGGAGGCGGGGGTGAATATGCACCCCAGACTGGATTTGGTTGGTCTAACGGGGTTGTGTTGGCATTCTTGGAGGAGTTTGGTTGGCCTCAAGATCGGAGTATAGATTGCTGA 1689 0.4553 MASSSSSSCSVVTPSTPLVSFLEQLQETALQTFGDSNFDPKTYVDLPLKFTLSETHQAFQNLPRLSSNGTVSAEVLKGFINRYFKGAGDDLVCWQPHDFVAEPEGFLTKVKHPEVRAWALKVHSLWRNLSRKVSREVEKNPQLHTLLPLPNPVVIPGSRFREVYYWDSYWVIRGLLVSKMHKTATAIVMNLVSLIEKYGFVLNGARQYYTNRSQPPLLSSMLYEIYRSTGDIELVKRCLPALLKEHAFWNSDIHRVTIVDAQGHSHNLNRYQAMWNKPRPESSTMDKKSASKFLNISEKQHFYCDIASAAESGWDFSTRWMRVPPDYSTLATTSVIPVDLNAYLLGMEINIAFFAKAIGDETTVKHFMELSDARKKAINSVFWSPSKKQWLDYWLNSGTCEVAHVWEAKHQNKNVFASNFVPLWMEPFYSDGSLVGNVVHALKTSGLIRAAGIATSLTDSGQQWDFPNGWAPLQHMLAEGLVKSGSKEARLLAEEIAIKWIRSNYVSYKKTGVMHEKLDVEKCGEYGGGGEYAPQTGFGWSNGVVLAFLEEFGWPQDRSIDC 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04029 562 ProSitePatterns Trehalase signature 2. 463 472 IPR018232 GO:0004555|GO:0005991
Arst4g04029 562 Gene3D - 20 560 IPR012341 GO:0005975
Arst4g04029 562 PANTHER TREHALASE 12 560 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 Pfam Trehalase 37 553 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 PRINTS Glycosyl hydrolase family 37 signature 303 320 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 PRINTS Glycosyl hydrolase family 37 signature 378 394 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 PRINTS Glycosyl hydrolase family 37 signature 268 285 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 PRINTS Glycosyl hydrolase family 37 signature 536 549 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 PRINTS Glycosyl hydrolase family 37 signature 198 216 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 PRINTS Glycosyl hydrolase family 37 signature 335 352 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 PRINTS Glycosyl hydrolase family 37 signature 456 472 IPR001661 GO:0004555|GO:0005991
Arst4g04029 562 SUPERFAMILY Six-hairpin glycosidases 33 555 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04029 Arst-Chr4 118800264 118804478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04029 1 562 Trehalose Biosynthesis Gene Families AT4G24040 58.053 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04029 K01194 - gmx:547539 863.603