Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03991 ATGTTGGACGAAGATACCAACGCCAACACCACCTCCTGGGCGCCGCGCGTGTGCGACACCTGCCGCTCTGCCCCATGTGCGGTCTTCTGCCGCGCTGACTCCGCGTATCTCTGCGCGTCATGCGACGCGCGCGTGCACGCGGCCAACACCTTGGCCTCGCGCCACGAGCGCGTGTGGGTATGCGAGGCCTGCGAACGCGCCCCGGCAGCGTTCCTTTGTAAGGCGGATGCAGCGTCGCTCTGTTCTTCTTGCGACGCTGACATCCACTCGGCTAACCCTCTGGCGAGTCGTCACCAGAGGGTGCCAATTGGACCCATGTACGGCCCACCATCCGTCCCGGTAACTAGGACGAATGGTGAGTTCGTTGGGATGGTTGAAGACGAAGAAGATGAAGATGATGACGAAGAAGAAGCTGCTTCTTGGTTGTTGTTGAACAACACCAACACCACCGCCGCCGTGACGGCCGGCACCAACAACAACCATAATAACAGTAACAGCAGCAACAACAACCAGAATCATCATCATCACCAACAACAGAGTAATAATAATGGTTTCTTGTTTGGTGGTGAGGTTGACGAGTATTTGGACCTTGTGGATTGTAATTCTTGTGGTGATGACGATAACAATCATCATCACAGCAACAATAACAATAACCACTTTGCGGTTGATGGTGTTGATCATCGTTATGAGCTATGGTGGTGGAATTACAATGCTTCTATTAGTCAAAGTGTATCAGTTTCATCAATGGAAGTTGGAGTAGTGCCAGAATCATCAATCAGCAATGGATCAATTTGCCATTCAAGACCACCAAAGGGAACAATTGACCTATTTTCAGGACCTACTCCAATGCAGATGAGTTCACATCTCACTCCAATGGACAGAGAAGCCAGAGTCCTAAGGTATAGAGAGAAGAAGAAGACAAGAAAATTCGAGAAGACCATAAGGTATGCATCAAGAAAGGCCTATGCAGAGACTCGGCCGCGAATCAAAGGCCGATTCGCCAAGAGAACAGATGTTGAAGCTGAAGTTGATCAGATGTTCTCCACACCATTGATTACAGAAGTTGGTTATGGCATTGTTCCTTCATTCTGA 1092 0.4982 MLDEDTNANTTSWAPRVCDTCRSAPCAVFCRADSAYLCASCDARVHAANTLASRHERVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHQRVPIGPMYGPPSVPVTRTNGEFVGMVEDEEDEDDDEEEAASWLLLNNTNTTAAVTAGTNNNHNNSNSSNNNQNHHHHQQQSNNNGFLFGGEVDEYLDLVDCNSCGDDDNNHHHSNNNNNHFAVDGVDHRYELWWWNYNASISQSVSVSSMEVGVVPESSISNGSICHSRPPKGTIDLFSGPTPMQMSSHLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTPLITEVGYGIVPSF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03991 363 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 350 IPR045281 GO:0009909
Arst4g03991 363 CDD Bbox1_BBX-like 17 60 - -
Arst4g03991 363 ProSiteProfiles CCT domain profile. 294 336 IPR010402 GO:0005515
Arst4g03991 363 SMART bboxneu5 13 60 IPR000315 GO:0008270
Arst4g03991 363 SMART bboxneu5 61 103 IPR000315 GO:0008270
Arst4g03991 363 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Arst4g03991 363 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Arst4g03991 363 MobiDBLite consensus disorder prediction 152 186 - -
Arst4g03991 363 Pfam B-box zinc finger 58 103 IPR000315 GO:0008270
Arst4g03991 363 CDD Bbox1_BBX-like 60 103 - -
Arst4g03991 363 Pfam CCT motif 294 336 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03991 Arst-Chr4 118454450 118456782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03991 1 363 C2C2-CO-like Transcription Factor Family AT3G02380 51.282 5.78e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Arst4g03991 zf-B_box 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03991 - K12135 adu:107486540 620.157