Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03960 ATGGATTTACTAAGTGGTCGCAAAGCAAATGAGATTTTTGAAGGGCAAGTTCATGTGTACAAACACATGTATGCTTACTTAGATTCTATGTGCCTTAAATGGTGCATTGAGTTAGAAATACCAACCATAATCTACAACCATGAAAAACCCATCACCCTTCATGAATTGATCTCAATTTTACAAGTTCCACCATCCAAAATTAGTGGTGTGGAGCGTCTTATGCGCCACCTAAGTCACAATGGATTCTTTGATATTGTAACAATCCATGATGATGATGGTGGTGATGAAAACAAAGAAAAAAAAGAAGCATATGCTCTCACTATTGCTTCTGAGCTTCTTGTTAAAGGCACTGAATATTGTTTAACTCCAATGGCTAAGTGTGGTCTTAATCCCCTTATGTCAAGTTCTTTTAACTTATTAGGAAAATGGACTTTAGAAAAAAATCTTACTTTATCTGAAATTTCCCTTGGAACAAATCTTTGGGACTTTCTTAGCAAAAACCCTTCAATTTTGACTTCCTTTAATGAGTCAATGGCTAGTGACTCTCAAATGGTGAAGTTGGCATTGAAAGATCATAGTGCTGTTTTTGAAGGGTTGGAATCCATTGTAGATGTTGGTGGTGGAAATGGAACCATATCTAAGATTATTAGTGACATGTTTCCCAAATTGAAGTGCATAGTGTTTGACCTTCCACATGTTGTGGAGAATTTTTCAGGAACCACCAGCAACAATTTGAGCTTTGTTGGTGGAGATATGTTCAATTATATACCTGAGGCTGATGTTGTTCTACTTAAGTGGATTCTACATGATTGGGATGATGAACATTGTGTAAAGATATTGAAGAAATGCAAAGATGCAATTTCAAAGAACACTAAAGAAGGAAAAGCAATTATCATAGATTTTGTGATAAATGAAAAACAAGATGAATTTGGACTAACTCAAATGAAGCTTAGAATGGATATTGCCATGACAAGTATGAATGGAAAGGAGAGAAGTGAAGAGGAATTCAATAAGCTTTTTTTGGAAGCAGGCTTTCAAGATTATAAAATATTTCCTTTAACCGGAATGTATTCTCTTATTGTGGTTTATCCTTAA 1095 0.3489 MDLLSGRKANEIFEGQVHVYKHMYAYLDSMCLKWCIELEIPTIIYNHEKPITLHELISILQVPPSKISGVERLMRHLSHNGFFDIVTIHDDDGGDENKEKKEAYALTIASELLVKGTEYCLTPMAKCGLNPLMSSSFNLLGKWTLEKNLTLSEISLGTNLWDFLSKNPSILTSFNESMASDSQMVKLALKDHSAVFEGLESIVDVGGGNGTISKIISDMFPKLKCIVFDLPHVVENFSGTTSNNLSFVGGDMFNYIPEADVVLLKWILHDWDDEHCVKILKKCKDAISKNTKEGKAIIIDFVINEKQDEFGLTQMKLRMDIAMTSMNGKERSEEEFNKLFLEAGFQDYKIFPLTGMYSLIVVYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03960 364 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Arst4g03960 364 Gene3D - 5 113 IPR036388 -
Arst4g03960 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Arst4g03960 364 SUPERFAMILY "Winged helix" DNA-binding domain 10 116 IPR036390 -
Arst4g03960 364 Pfam O-methyltransferase domain 154 346 IPR001077 GO:0008171
Arst4g03960 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 362 IPR029063 -
Arst4g03960 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 364 IPR016461 GO:0008168
Arst4g03960 364 FunFam Coniferyl alcohol 9-O-methyltransferase 3 113 - -
Arst4g03960 364 Gene3D Vaccinia Virus protein VP39 114 364 IPR029063 -
Arst4g03960 364 FunFam O-methyltransferase ZRP4 115 364 - -
Arst4g03960 364 PANTHER O-METHYLTRANSFERASE 16 349 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03960 Arst-Chr4 118201308 118203427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03960 30 350 Monolignol Biosynthesis Gene Families AT5G54160 31.307 1.40e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03960 K22588 K13262 gmx:100813225 457.218