Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03953 ATGGTTAAGCAAGCTGATTTAGTCATCATATGTGTCACTGTTGGTGTGGCCCTTGGAGTTCTCATAGCTTGTGCCACATTCTTCGCCGCGAGGTGGTACAAGAAGCGCATTCGACTCATAAGATCTGCAAATGATCCTGGTTCAACAACTCTTCCAATAAGAACAAATGGATTGGAAGCAAGCACTGAAATTAGTGCTTCTCTCACAAGTTCCATAGCCATTTCAGGATCAGATAATCTACAAAGGAAGACACATTATTTCGGTTGGTGGAATCATCAAACCAAGGATCCAGTTTCCCCTGCTTCTGGAATTCTGAAGTACTCTTACAAAGAAATTCAAAAGGCCACAAAGAATTTCACAAATACATTAGGAGAAGGATCATTTGGCACAGTTTATAAAGCCACAATGGCTACAGGAGAGGTGGTAGCTGTGAAGATGCTTGCTCCCAACTCCAAACAAGGAGAGAAAGAGTTCCAGACAGAGGTACTTCTGCTAGGAAGACTGCATCATCGGAATCTTGTGAACTTGTTAGGATACTGTGTGGATAAAGGACAGCGTATGTTGGTTTATGAATTCATGAGTAATGGAAGTTTATCAAACCTTTTATATGATGAAGACAAGGATCTAAGTTGGGATGACAGGCTGCAGATTGCTGTTGATATTTCACATGGAATACAATACCTTCATGAAGGAGCAGTCCCACCAGTGATACATCGCGATTTGAAATCGGCCAACATACTTCTAGATCACTCCATGAGAGCTAAGGTGGCTGATTTTGGGCTATCAAAGGAAGAGGTATTTGATGACCACAAATCTGGCCTTAAAGGCACATATGGCTATATGGATCCAGCATACATCTCCACAAGCAAGTTCACAATGAAGAGTGACATTTACAGTTTTGGTATAATAATCTTTGAGCTCATTACTGCCATCCACCCCCATCAAAATTTGATGGAATACATCAACCTTGCTGCAATGGACTATGATGGCATAGATGGGATTATTGAGACACAACTTGTGGGGAAATGCAACCTTGAAGAAGTAAGGAAGCTAGCCAAAATTGCTCACAAATGTTTGCATAAATCACCTAGGAAAAGACCCTCTATTGGTGAAATATCACAAGGTATAATGATGATTAAGCAAAGGCGCCTTGTGAAGGAAGACACCATGTCATTTGCAAGCAGTAACTACTCAAGAACTTTGAGTAGGATAGAGGATCAACAAGTTGAGTTAAGTAGGATAGCCACCACCATGAACCAAAGAGAAGGTAGATGA 1275 0.411 MVKQADLVIICVTVGVALGVLIACATFFAARWYKKRIRLIRSANDPGSTTLPIRTNGLEASTEISASLTSSIAISGSDNLQRKTHYFGWWNHQTKDPVSPASGILKYSYKEIQKATKNFTNTLGEGSFGTVYKATMATGEVVAVKMLAPNSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCVDKGQRMLVYEFMSNGSLSNLLYDEDKDLSWDDRLQIAVDISHGIQYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDDHKSGLKGTYGYMDPAYISTSKFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDYDGIDGIIETQLVGKCNLEEVRKLAKIAHKCLHKSPRKRPSIGEISQGIMMIKQRRLVKEDTMSFASSNYSRTLSRIEDQQVELSRIATTMNQREGR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03953 424 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 193 400 - -
Arst4g03953 424 ProSiteProfiles Protein kinase domain profile. 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03953 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Arst4g03953 424 Gene3D Transferase(Phosphotransferase) domain 1 193 400 - -
Arst4g03953 424 CDD STKc_IRAK 123 374 - -
Arst4g03953 424 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Arst4g03953 424 Gene3D Phosphorylase Kinase; domain 1 85 192 - -
Arst4g03953 424 SUPERFAMILY Protein kinase-like (PK-like) 88 373 IPR011009 -
Arst4g03953 424 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 387 - -
Arst4g03953 424 Pfam Protein tyrosine and serine/threonine kinase 119 374 IPR001245 GO:0004672|GO:0006468
Arst4g03953 424 FunFam Leucine-rich repeat receptor-like protein kinase 94 192 - -
Arst4g03953 424 SMART serkin_6 117 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03953 424 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03953 Arst-Chr4 118150083 118153563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03953 108 418 Receptor kinase-like Gene Family AT4G02010 38.906 1.09e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Arst4g03953 PK_Tyr_Ser-Thr 1.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03953 - - gmx:100794239 676.011