LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g03927	ATGGCTATGTTGTTGGGAATCATTGGTGGGGTGGTGTTGGTGCTCTGTTTTTGCTCTGTTTTCTTGTTGAAGTGGAATGAAGTGAGGTATAGGAGGAAAGGATTGCCACCAGGGACAATGGGGTGGCCTCTTTTTGGAGAAACCACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAACACCAGAGAACAAGGTATGGTAGTTTTTTCAAATCACACATACTTGGGTGTCCTACCATAGTGTCAATGGATCCAGAGCTGAACAGATACATTCTGATGAATGAATCAAAAGGGCTTGTTCCTGGTTACCCTCAATCAATGTTGGATATTTTAGGAAAATGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTATATGAGAGGTGCATTATTATCCATCATTAGCCCTACTTTGATCAAAGATCAGCATCTGCCTAAGATTGATGAGTTCATGAGATCTTTTCTTAGTCATTGGGATAACAGAATCATCAACCTTCAAGACAAAACCAAAGAGATGGCATTTCTCTCATCACTTAAGCAGATTGCTGGCATGGAATCTAGCTCAATATCTCATCCATTCATGACAGAGTTCTTTAAGCTTGTTCTAGGAACACTCTCCTTGCCTATTGATCTTCCCGGCACAAATTATCGCCGCGGACTACAGGCAAGGAAGAACATAGTTAGCATTCTAAGTCAGTTGCTAGATGAAAGGAGAGTCTCACAAGAAACACACCAAGACATGCTTGGAAGCTTGATGATGGGTAGAAGAGAAAACAGATACAAATTAACTGATGAAGAGATCATTGATCTGATAATCACAATCATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTCAAGTACCTCCATGATCATCCCAAAGTTCTTGAAGAAATGAGAAAAGAGCATTTTGCTATAAGAGAGAGAAAGAAGCCAGAGGATCCAATTGATTGTAATGATCTTAAGTCAATGAGGTTCACTCGTGCGGTTATTTTTGAGACCTCGAGATTAGCTACAATAGTCAATGGTGTTCTGAGAAAAACAACTCATGACATGGAACTAAATGGGTATTTGATTCCTAAAGGTTGGAGAATATATGTATATACAAGAGAGATAAATTATGACCAGTTTCTGTATCAAGATCCACTGACATTTAATCCATGGAGATGGCTGGGAAATAGCTTAGAGTCACAGAGCCACTTCTTGATATTTGGAGGAGGCACTAGGCAGTGTCCAGGAAAAGAGTTGGGAATAGCAGAAATTTCCACTTTCTTACATTATTTTGTAACTAGATACAGGTGGGAAGAAGTAGGGGGAGATAAACTAATGAAATTTCCTAGAGTTGAGGCACCAAATGGACTTCACATTAGGGTCTCATCTTTTACTAACTAG	1407	0.3959	MAMLLGIIGGVVLVLCFCSVFLLKWNEVRYRRKGLPPGTMGWPLFGETTEFLKQGPNFMKHQRTRYGSFFKSHILGCPTIVSMDPELNRYILMNESKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIKDQHLPKIDEFMRSFLSHWDNRIINLQDKTKEMAFLSSLKQIAGMESSSISHPFMTEFFKLVLGTLSLPIDLPGTNYRRGLQARKNIVSILSQLLDERRVSQETHQDMLGSLMMGRRENRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLEEMRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDQFLYQDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSSFTN	468

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Arst4g03927	468	PRINTS	E-class P450 group I signature	333	351	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Arst4g03927	468	PRINTS	E-class P450 group I signature	406	416	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Arst4g03927	468	PRINTS	E-class P450 group I signature	416	439	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Arst4g03927	468	PRINTS	E-class P450 group I signature	63	82	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Arst4g03927	468	PRINTS	E-class P450 group I signature	267	284	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Arst4g03927	468	PRINTS	E-class P450 group I signature	373	397	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Arst4g03927	468	PANTHER	CYTOCHROME P450 26	33	444	-	-
Arst4g03927	468	Gene3D	Cytochrome P450	26	465	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Arst4g03927	468	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	409	418	IPR017972	GO:0005506\|GO:0016705
Arst4g03927	468	FunFam	Cytochrome P450 85A1	26	465	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g03927	Arst-Chr4	117926221	117929804	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g03927	83	466	Cytochrome P450	AT5G38970	70.130	0.0	566

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g03927	K09590		-	gmx:100785414	829.706

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst4g03927	4	117926221	117929804	Arst4g03927	4	117926221	117929804	ECH
	Arst10g03155	10	99950808	99957234	Arst4g03927	4	117926221	117929804	PCT

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