Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03920 ATGATGGGCTTCTTCTTCTCTTTGATGTCACACCACAAAGCTGTTCCCACTTGCTTTGTGTTCTTCTTCCTGCTTTCTTGCACCTGCTTCACTTCAACAGAAGCTTACGATGCACTTGACCCAAATGGAAACATCACAATCAAATGGGATATCATAAGCTGGACACCTGATGGTTATGTTGCTGTCGTTACGATGAACAACTTCCAACAATATCGGCATATTGCAGCACCTGGCTGGTCAATGGGATGGACATGGGCGAAGAAGGAGGTTATATGGAGCATGATGGGAGGACAGACCACTGAACAAGGAGATTGTTCAAAGTTTAAGGGAAACCCTCCACATTGCTGTAAGAAGGATCCGACCGTTGTGGATTTACTTCCCGGCACACCTTACAACCAGCAAATAGCAAATTGCTGCAAGGGTGGAGTACTTAGCTCATGGGCCCAGGATCCGACCAACGCAGTCGCATCGTTTCAAGTCAGTGTTGGTAGAGCTGGAACCACCAACAGAACTGTCAAAGTGCCCAAAAATTTCACCTTGAAAGCTCCCGGTCCGGGCTATACATGCGGGCCAGCAAAAATTGTGCCCCCAACAAAGTTCATTCAATCAGACAAAAGAAGAGTGACCCAAGCACTCATGACATGGAACGTGACATGCACATATTCGCAGTTTCTAGCCCAAAAAACTCCCACTTGCTGTGTCTCTCTCTCGTCGTTCTATAATGATACTATTGTGCCTTGCCCAACATGTGCATGTGGCTGCCAGAGCAACTCATCTTGTGTAAATGCAAATACGCCACATTTGGCATCGGTCGTTGCTGGAAAGAATAACTTTTCTCCTTTAGTTCAATGCACTAGCCATATGTGTCCGGTTAGAGTCCACTGGCACGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACGGTTACCAATTTCAATTACAGGATGAATTATTCAGAGTGGAACTTAGTTGTTCAACACCCGAACTTTGATAATCTGACTCAACTTTTCAGTTTCAACTACAAGTCATTAACTCCTTATGGTGACATAAATGATACTGCTATGCTTTGGGGAGTTAAGTTCTATAATGATTTTCTCAATGAAGCTGGGCCTAATGGTAATGTACAATCAGAGTTGCTCTTCAGAAAGGATAAGTCAACTTTCACTTTCGAAAAAGGTTGGGCTTTCCCTCGAAGGATCTATTTCAATGGCGACAATTGCGTGATGCCACCACCGGATGCTTATCCATGGTTGCCTAATGCTGGTTCTCAAAAGGAAGTTTCCTTGCTTGTTTTAGTGTTGGCTTATTTGGTATCCTTGCTCTTTTACGCATGTGCTTGA 1347 0.4439 MMGFFFSLMSHHKAVPTCFVFFFLLSCTCFTSTEAYDALDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIAAPGWSMGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVASFQVSVGRAGTTNRTVKVPKNFTLKAPGPGYTCGPAKIVPPTKFIQSDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSCVNANTPHLASVVAGKNNFSPLVQCTSHMCPVRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGDINDTAMLWGVKFYNDFLNEAGPNGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSQKEVSLLVLVLAYLVSLLFYACA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03920 448 PIRSF COBRA 7 448 IPR006918 GO:0010215|GO:0016020
Arst4g03920 448 PANTHER PROTEIN COBRA 23 437 IPR006918 GO:0010215|GO:0016020
Arst4g03920 448 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03920 Arst-Chr4 117890288 117893314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03920 21 446 COBRA Gene Family AT3G02210 74.769 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03920 - - gmx:100783820 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03920 4 117890288 117893314 Arst4g03920 4 117890288 117893314 ECH
Arst10g03149 10 99866476 99869526 Arst4g03920 4 117890288 117893314 PCT
Arst4g03920 4 117890288 117893314 Arst10g03148 10 99863146 99866304 PCT