Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03907 ATGGTCCTCAAATGTTTACGCTTTGGTGATTCAAAGAAGGAGAAAAATTATCCGACGGTAATAGAAGAGCTATGCCATCAATTTTCCTTTGAAGATCTTAGAAAATCAACCAACAACTTTGACGATAAACTAGTAATTGGGTGGTTACCCTTTGGTATGGTATACAAAGGTTGGCTCAAACATAATGATGCTGCAACCGATCATACCATTACATTGAAGGTGACGGTGCCTCAATACCCCATCCAAGGTTCACTTGAATTCAAGAAGGAAATTGAGGTGCTATGTCAGCTTCGTCACCCTAATATAATCTCTATAATAGGCTTCTGCAACCAAGAAAAGGAAAAGATTGTTGTGTATGAGTACATGGCCAATGGATCACTTGGTGATTACTTGAGAGATAGGAATAGAAATAACCAACCACTGTCATGGAAGAAAAGACTAGACATCTGCATTGGAGTAGCACGTGCTCTACACTACCTTCACTCAGGAGCCAAGCGTGCTATCATTCATCGTGATATAAATCCAAGTAATATTCTTTTGGATAAGAATATGATGCCCAAACTTACAAATTTTGGGATATCATTGCAGGGAGGGCTCTCTACATTGAAGCCAATGCAAATCAAAGTAGATAAGATTGTAGGTACATCTGCATTGATGGCTCCGGAGTATGCTATACACAGTATTGTTACTTATAAATGCGATGTTTACTCCTTTGGTTTGGTTCTACTACACAAGGTAGGCCATAATGTGTTAAACTACTTAATTCAATATGAAGAGCACAAACTTGAGGAGACAATGGAACCAATTCTGAAAGGAAGGATTGCGCCAGAATGTTGGCAAGTATTCACTAGTGTCATACAAAGTTGCTTGGAGTACGAAGCAGATGAGCGACCAACAATGGGGGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCATTGCAGCAATAA 948 0.3956 MVLKCLRFGDSKKEKNYPTVIEELCHQFSFEDLRKSTNNFDDKLVIGWLPFGMVYKGWLKHNDAATDHTITLKVTVPQYPIQGSLEFKKEIEVLCQLRHPNIISIIGFCNQEKEKIVVYEYMANGSLGDYLRDRNRNNQPLSWKKRLDICIGVARALHYLHSGAKRAIIHRDINPSNILLDKNMMPKLTNFGISLQGGLSTLKPMQIKVDKIVGTSALMAPEYAIHSIVTYKCDVYSFGLVLLHKVGHNVLNYLIQYEEHKLEETMEPILKGRIAPECWQVFTSVIQSCLEYEADERPTMGEVEVLLEHALSLQQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03907 315 Gene3D Phosphorylase Kinase; domain 1 6 121 - -
Arst4g03907 315 SUPERFAMILY Protein kinase-like (PK-like) 16 303 IPR011009 -
Arst4g03907 315 FunFam Os07g0541700 protein 122 215 - -
Arst4g03907 315 Pfam Protein tyrosine and serine/threonine kinase 50 304 IPR001245 GO:0004672|GO:0006468
Arst4g03907 315 PANTHER OS07G0166700 PROTEIN 24 314 IPR045272 GO:0004714|GO:0006468
Arst4g03907 315 FunFam Receptor-like protein kinase ANXUR2 5 121 - -
Arst4g03907 315 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Arst4g03907 315 PRINTS Tyrosine kinase catalytic domain signature 233 255 IPR001245 GO:0004672|GO:0006468
Arst4g03907 315 PRINTS Tyrosine kinase catalytic domain signature 162 180 IPR001245 GO:0004672|GO:0006468
Arst4g03907 315 PRINTS Tyrosine kinase catalytic domain signature 119 132 IPR001245 GO:0004672|GO:0006468
Arst4g03907 315 Gene3D Transferase(Phosphotransferase) domain 1 122 315 - -
Arst4g03907 315 ProSiteProfiles Protein kinase domain profile. 40 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03907 Arst-Chr4 117826379 117827494 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03907 10 315 Receptor kinase-like Gene Family AT5G39000 38.154 1.90e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Arst4g03907 PK_Tyr_Ser-Thr 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03907 - - adu:107486243 645.966