Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03900 ATGCTTGGCAAATATTTGAGCTTCTGCCATTCAGAGGATGCAAGTTCATCTAAGAAATGCTATCTAACAGTGATTGAAGAGCTACTACCCCAATTTTCTCTTGCTGATCTTAGGAAATCAACCAACAACTTCAATGAAAACCAAGTAACTAGAAGATCAGTATTTAACACAGTATACAAAGGTTGTCTCAAACATAATGGTGTGACTGATTATGCAGTGACATTGAAGAGGTTGAAAAGTAAATCTGACCAATGGAAGTTCAGGAAGGAAATTGAGTTCCACTGCCAGCTCTCTCATCCTAATTTGGACTCTCTTATAGGATTCTGTGACCACAAAGAAGAGAAGATTCTTGTGTATGAACACATGTCCAATGGCTCTCTCTATGATTGCTTGCGTTCCAAGGATATCGAGCCACTTTCATGGAAGAAAAGGCTAGAAATATGCATCGGAGCAGCGCGTGGGCTACACTACCTTCACACGGGAGCTAAGCGCCCTATCTTTCACTGCGATATCAAACCTCAAAATATTCTTTTGGATAGCAACATGGTACCAAAACTCTCACATCTTGGATTTTCCTTACAAGGTCCACTATTAAGGTCAAAGGCAAAGCCTATAAAACTGGACATGATTATTGGTACACCTGGTTTCATGGCACCTGAGTATGTCCTAACCAAAATCTTCACAGATAAATGTGATGTTTATTCCTTTGGGATAGTTTTAATGGTAGTTTTATCCACTAGCTACAAGCAGAGCTTCTTTGAGAAGATGTACATGATGGCCGACTCAGATTTGTTTTTAGAAGAGCCATTGTCTTTAATGACTCCATATGTGGATATACCTAGCTTTTTGGAGAGGTTTTCGGTTGATGAGATTATTGATCCAGTGTTATTGGGAAAGATTGCACCAGAATGTTTGGGAGTATTCATAGATATCACAAAAAGATGCTTAAGTAAAGATGCAAACGAAAGACCAGATATGGGTGAAGTACAAGTTGAACTTGAGCAAGCACTAGCACTACAAGAGGATGAAGATGCATGCCCGGAACCATGA 1050 0.3962 MLGKYLSFCHSEDASSSKKCYLTVIEELLPQFSLADLRKSTNNFNENQVTRRSVFNTVYKGCLKHNGVTDYAVTLKRLKSKSDQWKFRKEIEFHCQLSHPNLDSLIGFCDHKEEKILVYEHMSNGSLYDCLRSKDIEPLSWKKRLEICIGAARGLHYLHTGAKRPIFHCDIKPQNILLDSNMVPKLSHLGFSLQGPLLRSKAKPIKLDMIIGTPGFMAPEYVLTKIFTDKCDVYSFGIVLMVVLSTSYKQSFFEKMYMMADSDLFLEEPLSLMTPYVDIPSFLERFSVDEIIDPVLLGKIAPECLGVFIDITKRCLSKDANERPDMGEVQVELEQALALQEDEDACPEP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03900 349 PANTHER OS07G0166700 PROTEIN 30 340 IPR045272 GO:0004714|GO:0006468
Arst4g03900 349 Gene3D Transferase(Phosphotransferase) domain 1 122 346 - -
Arst4g03900 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Arst4g03900 349 SUPERFAMILY Protein kinase-like (PK-like) 21 333 IPR011009 -
Arst4g03900 349 Pfam Protein tyrosine and serine/threonine kinase 54 331 IPR001245 GO:0004672|GO:0006468
Arst4g03900 349 Gene3D Phosphorylase Kinase; domain 1 5 121 - -
Arst4g03900 349 FunFam Receptor-like protein kinase ANXUR2 9 121 - -
Arst4g03900 349 SMART serkin_6 44 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03900 349 ProSiteProfiles Protein kinase domain profile. 44 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03900 Arst-Chr4 117776289 117777912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03900 34 348 Receptor kinase-like Gene Family AT5G59700 39.688 2.87e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Arst4g03900 PK_Tyr_Ser-Thr 1.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03900 - - ahf:112797906 669.077