Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03899 ATGACAGAAGAATCTTGTTTGTGTTTGATAGCCAAACGGGTATCTCAAATTGGAATCATGCTTCTCAAGTGTATAAGCTTTCCTGTTTCAAAGAAGACAAGCTCATCCAAGAAGCACTCTCCAACGATTATAGAATTGTTATGCCATCAATTTTCCCTGGAAGATCTTAAAAGATCAACCAACAACTTCAACCAGAGATTAGTAGTTGGAAAAGGAGGTTTTAGCACTGTATACAAAGGATGTCTCAAACACAATGGTGGATCAGACCATACAATTGCATTAAAGCTCAAGTGTTGCAACTCCAACCAGCATTTCCTTGAGTTCATGAAGGAAATTGAGTTGCTATGCCAGCTTCATCATCCTAATTTGATCTCTCTTGTAGGATTTTGCAACCATGAAAAGAAAAAGATTATTGTGTATGAGTTCATGTGCAATGGCTCTCTTCATGATCACCTATACAATAGGGACAAGACACCACTATCATGGCAGAAAAGGCTAGAGATATGTATAGGAATCGCGCGTGGACTACACTACCTTCATGCTGGAGCCAAGCGCTCTATCTTTCATTGTGACATAAAACCTAGTAACATCCTTTTGGATAGCAATATGGTGCCTAAGCTCTCAGACTTTGGGCTTTCATTGCAGGGACCACTATCTACTTCCAAGCCAAAACCAATTGCAGTAGACTATGTTGCAGGTACATTTGGATACTTAGCCCCTGAGTGTTTCCAACGCCTGACCGTTACAGATAAATGTGACGTTTACTCGTTTGGTATGGTTCTACTTGTAATGGTATGCATGAAGGAGAAGGATTTGTTTCTTAACAAGGCCAACATGTTAGGTAACCAACATTTGGAGGGGAAGAGTGAAATCAAATACTTGGAAAAGTTCATTGATGATCAAGTTCAACCATGGAATGTAATAGCCTTTATGCAGCGATTCCCAATCGAAGAGATCATTGATCCAACGCTCAGGGGAAAGATTGTACCAGAGTGCTGGGAAGTATTCATGGATGTTACAAAAAGATGTTTGATGCATGAACCTGATGAACGACCAACAATGGGTGAAGTAGAGGTGTTGCTTGAATATGCTTTGTTATTGCAGGCACAAGCAGATATCAAAAGGAACAATGGTTCTTATTCTTTATCATCCACCACCATTATAAACTTAGGTGAAGTCATTTGTATGCATGATATTCATTTAGAAGAGGTGATATTTCATCAGTTTTCTCTAGCCGATCTTAGGCGAACAACCTTCGACTTTGAACGCAGAGTCATCGGCAGAGGAAGCTTTGGTACAGCATACAGAGGTCGTATCTTACTAAATGGAGCTACTTATCATTCAATTGCAATTAAGAAGTTGGATTGGTCATCTACATGTGATAGTGATATACAGTGGAATTTAAAAGATATTGAGAATATTTCCCAACTTCGCCATCCGAATTTGGTCTCTCTTTTTGGATTCTGTGATGAACTTGATGAGAAGATTCTTGTATACATGTATATTCCCAATGGATCTCTCCATTATCACTTAAATTGGAATGAATCAGCTCTAACATGGAAGAAAAGACTAGAAATATGCATTGGAGTAGCAGAAGGATTGAACTACCTTCACACAGCATCAATTTTTCACCATAACATAAAACTCAGCAACATCCTTTTGGATTATGATATGGTGCCCAAACTCTCAGATTTTGGGCTCCCCTGGTCCGAGAAAATTCATGCAGAAGATTATGCTGCTCCGGAGTTGTTACAAGGACATGATTTCACAGATAAATGTGATGTTTATTCCTTTGGTATAATTCTCTTAAAAATGGTATTAACAAACAAGCTACCAATTGTTGAAGGGGTTATTTATCTCAATCTAAAGGGAAAGATTGCACCACAGTGTTGGGAAGTATTCTTGAATGTCATAAAATGCTGTTTGAAGTTTGAAGCAAATGAGAGACCGACAATGAATGAAGTGATAGCTCAACTTCAACATGCCCTGGCACTGCAAGAGGAAGCAGATTCCAACATAAGTGGTGATTACAACTTGTTATCTGTGACCTTTGATCCTCCGGTTGGAGGAAGCATATATTATTAA 2085 0.388 MTEESCLCLIAKRVSQIGIMLLKCISFPVSKKTSSSKKHSPTIIELLCHQFSLEDLKRSTNNFNQRLVVGKGGFSTVYKGCLKHNGGSDHTIALKLKCCNSNQHFLEFMKEIELLCQLHHPNLISLVGFCNHEKKKIIVYEFMCNGSLHDHLYNRDKTPLSWQKRLEICIGIARGLHYLHAGAKRSIFHCDIKPSNILLDSNMVPKLSDFGLSLQGPLSTSKPKPIAVDYVAGTFGYLAPECFQRLTVTDKCDVYSFGMVLLVMVCMKEKDLFLNKANMLGNQHLEGKSEIKYLEKFIDDQVQPWNVIAFMQRFPIEEIIDPTLRGKIVPECWEVFMDVTKRCLMHEPDERPTMGEVEVLLEYALLLQAQADIKRNNGSYSLSSTTIINLGEVICMHDIHLEEVIFHQFSLADLRRTTFDFERRVIGRGSFGTAYRGRILLNGATYHSIAIKKLDWSSTCDSDIQWNLKDIENISQLRHPNLVSLFGFCDELDEKILVYMYIPNGSLHYHLNWNESALTWKKRLEICIGVAEGLNYLHTASIFHHNIKLSNILLDYDMVPKLSDFGLPWSEKIHAEDYAAPELLQGHDFTDKCDVYSFGIILLKMVLTNKLPIVEGVIYLNLKGKIAPQCWEVFLNVIKCCLKFEANERPTMNEVIAQLQHALALQEEADSNISGDYNLLSVTFDPPVGGSIYY 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03899 694 Pfam Protein tyrosine and serine/threonine kinase 424 659 IPR001245 GO:0004672|GO:0006468
Arst4g03899 694 Pfam Protein tyrosine and serine/threonine kinase 68 358 IPR001245 GO:0004672|GO:0006468
Arst4g03899 694 FunFam Receptor-like protein kinase ANXUR2 29 142 - -
Arst4g03899 694 ProSiteProfiles Protein kinase domain profile. 63 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03899 694 SUPERFAMILY Protein kinase-like (PK-like) 405 662 IPR011009 -
Arst4g03899 694 Gene3D Phosphorylase Kinase; domain 1 394 501 - -
Arst4g03899 694 PANTHER OS07G0166700 PROTEIN 48 368 IPR045272 GO:0004714|GO:0006468
Arst4g03899 694 SUPERFAMILY Protein kinase-like (PK-like) 35 357 IPR011009 -
Arst4g03899 694 ProSitePatterns Protein kinases ATP-binding region signature. 69 95 IPR017441 GO:0005524
Arst4g03899 694 ProSiteProfiles Protein kinase domain profile. 420 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03899 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Arst4g03899 694 SMART serkin_6 420 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03899 694 SMART serkin_6 63 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03899 694 Gene3D Transferase(Phosphotransferase) domain 1 143 381 - -
Arst4g03899 694 Gene3D Transferase(Phosphotransferase) domain 1 502 682 - -
Arst4g03899 694 ProSitePatterns Protein kinases ATP-binding region signature. 426 453 IPR017441 GO:0005524
Arst4g03899 694 Gene3D Phosphorylase Kinase; domain 1 24 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03899 Arst-Chr4 117761807 117764232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03899 407 669 Receptor kinase-like Gene Family AT5G39000 36.393 5.58e-45 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst4g03899 PK_Tyr_Ser-Thr 8.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03899 - - adu:107486597 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03899 4 117761807 117764232 Arst4g03899 4 117761807 117764232 ECH