Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst4g03898 | ATGACAGAAGAATCTTGTTTGTGTTTGATAGCCAAACGGGTATCTCAAATTGGAATCATGCTTCTCAAGTGTATAAGCTTTCCTGTTTCAAAGAAGACAAGCTCATCCAAGAAGCACTCTCCAACGATTATAGAATTGTTATGCCATCAATTTTCCCTGGAAGATCTTAAAAGATCAACCAACAACTTCAACCAGAGATTAGTAGTTGGAAAAGGAGGTTTTAGCACTGTATACAAAGGATGTCTCAAACACAATGGTGGATCAGACCATACAATTGCATTAAAGCTCAAGTGTTGCAACTCCAACCAGCATTTCCTTGAGTTCATGAAGGAAATTGAGTTGCTATGCCAGCTTCATCATCCTAATTTGATCTCTCTTGTAGGATTTTGCAACCATGAAAAGAAAAAGATTATTGTGTATGAGTTCATGTGCAATGGCTCTCTTCATGATCACCTATACAATAGGGACAAGACACCACTATCATGGCAGAAAAGGCTAGAGATATGTATAGGAATCGCGCGTGGACTACACTACCTTCATGCTGGAGCCAAGCGCTCTATCTTTCATTGTGACATAAAACCTAGTAACATCCTTTTGGATAGCAATATGGTGCCTAAGCTCTCAGACTTTGGGCTTTCATTGCAGGGACCACTATCTACTTCCAAGCCAAAACCAATTGCAGTAGACTATGTTGCAGTCTCACTTGTAGGTACATTTGGATACTTAGCCCCTGAGTGTTTCCAACGCCTGACCGTTACAGATAAATGTGACGTTTACTCGTTTGGTATGGTTCTACTTGTAATGGTATGCATGAAGGAGAAGGATTTGTTTCTTAACAAGGCCAACATGTTAGGTAACCAACATTTGGAGGGGAAGAGTGAAATCAAATACTTGGAAAAGTTCATTGATGATCAAGTTCAACCATGGAATGTAATAGCCTTTATGCAGCGATTCCCAATCGAAGAGATCATTGATCCAACGCTCAGGGGAAAGATTGTACCAGAGTGCTGGGAAGTATTCATGGATGTTACAAAAAGATGTTTGATGCATGAACCTGATGAACGACCAACAATGGGTGAAGTAGAGGTGTTGCTTGAATATGCTTTGTTATTGCAGGCACAAGCAGATATCAAAAGGAACAATGGTTCTTATTCTTTATCATCCACCACCATTATAAACTTAGGTGAAGTCATTTGTATGCATGATATTCATTTAGAAGAGGTGATATTTCATCAGTTTTCTCTAGCCGATCTTAGGCGAACAACCTTCGACTTTGAACGCAGAGTCATCGGCAGAGGAAGCTTTGGTACAGCATACAGAGGTCGTATCTTACTAAATGGAGCTACTTATCATTCAATTGCAATTAAGAAGTTGGATTGGTCATCTACATGTGATAGTGATATACAGTGGAATTTAAAAGATATTGAGAATATTTCCCAACTTCGCCATCCGAATTTGGTCTCTCTTTTTGGATTCTGTGATGAACTTGATGAGAAGATTCTTGTATACATGTATATTCCCAATGGATCTCTCCATTATCACTTAAATTGGAATGAATCAGCTCTAACATGGAAGAAAAGACTAGAAATATGCATTGGAGTAGCAGAAGGATTGAACTACCTTCACACAGCATCAATTTTTCACCATAACATAAAACTCAGCAACATCCTTTTGGATTATGATATGGTGCCCAAACTCTCAGATTTTGGGCTCCCCTGGTCCGAGAAAATTCATGCAGAAGATTATGCTGCTCCGGAGTTGTTACAAGGACATGATTTCACAGATAAATGTGATGTTTATTCCTTTGGTATAATTCTCTTAAAAATGGTATTAACAAACAAGCTACCAATTGTTGAAGGGGTTATTTATCTCAATCTAAAGGGAAAGATTGCACCACAGTGTTGGGAAGTATTCTTGAATGTCATAAAATGCTGTTTGAAGTTTGAAGCAAATGAGAGACCGACAATGAATGAAGTGATAGCTCAACTTCAACATGCCCTGGCACTGCAAGAGGAAGCAGATTCCAACATAAGTGGTGATTACAACTTGTTATCTGTGACCTTTGATCCTCCGGTTGGAGGAAGCATATATTATTAA | 2097 | 0.3882 | MTEESCLCLIAKRVSQIGIMLLKCISFPVSKKTSSSKKHSPTIIELLCHQFSLEDLKRSTNNFNQRLVVGKGGFSTVYKGCLKHNGGSDHTIALKLKCCNSNQHFLEFMKEIELLCQLHHPNLISLVGFCNHEKKKIIVYEFMCNGSLHDHLYNRDKTPLSWQKRLEICIGIARGLHYLHAGAKRSIFHCDIKPSNILLDSNMVPKLSDFGLSLQGPLSTSKPKPIAVDYVAVSLVGTFGYLAPECFQRLTVTDKCDVYSFGMVLLVMVCMKEKDLFLNKANMLGNQHLEGKSEIKYLEKFIDDQVQPWNVIAFMQRFPIEEIIDPTLRGKIVPECWEVFMDVTKRCLMHEPDERPTMGEVEVLLEYALLLQAQADIKRNNGSYSLSSTTIINLGEVICMHDIHLEEVIFHQFSLADLRRTTFDFERRVIGRGSFGTAYRGRILLNGATYHSIAIKKLDWSSTCDSDIQWNLKDIENISQLRHPNLVSLFGFCDELDEKILVYMYIPNGSLHYHLNWNESALTWKKRLEICIGVAEGLNYLHTASIFHHNIKLSNILLDYDMVPKLSDFGLPWSEKIHAEDYAAPELLQGHDFTDKCDVYSFGIILLKMVLTNKLPIVEGVIYLNLKGKIAPQCWEVFLNVIKCCLKFEANERPTMNEVIAQLQHALALQEEADSNISGDYNLLSVTFDPPVGGSIYY | 698 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst4g03898 | 698 | ProSiteProfiles | Protein kinase domain profile. | 63 | 370 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst4g03898 | 698 | Pfam | Protein tyrosine and serine/threonine kinase | 68 | 362 | IPR001245 | GO:0004672|GO:0006468 | |
| Arst4g03898 | 698 | Pfam | Protein tyrosine and serine/threonine kinase | 428 | 663 | IPR001245 | GO:0004672|GO:0006468 | |
| Arst4g03898 | 698 | FunFam | Receptor-like protein kinase ANXUR2 | 29 | 142 | - | - | |
| Arst4g03898 | 698 | Gene3D | Phosphorylase Kinase; domain 1 | 398 | 505 | - | - | |
| Arst4g03898 | 698 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 361 | IPR011009 | - | |
| Arst4g03898 | 698 | SUPERFAMILY | Protein kinase-like (PK-like) | 409 | 666 | IPR011009 | - | |
| Arst4g03898 | 698 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 143 | 375 | - | - | |
| Arst4g03898 | 698 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 385 | - | - | |
| Arst4g03898 | 698 | Gene3D | Transferase(Phosphotransferase) domain 1 | 506 | 686 | - | - | |
| Arst4g03898 | 698 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 95 | IPR017441 | GO:0005524 | |
| Arst4g03898 | 698 | Gene3D | Phosphorylase Kinase; domain 1 | 24 | 142 | - | - | |
| Arst4g03898 | 698 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672|GO:0006468 | |
| Arst4g03898 | 698 | PANTHER | OS07G0166700 PROTEIN | 48 | 372 | IPR045272 | GO:0004714|GO:0006468 | |
| Arst4g03898 | 698 | SMART | serkin_6 | 63 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst4g03898 | 698 | SMART | serkin_6 | 424 | 668 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst4g03898 | 698 | ProSiteProfiles | Protein kinase domain profile. | 424 | 668 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst4g03898 | 698 | ProSitePatterns | Protein kinases ATP-binding region signature. | 430 | 457 | IPR017441 | GO:0005524 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst4g03898 | Arst-Chr4 | 117761807 | 117764232 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst4g03898 | 411 | 673 | Receptor kinase-like Gene Family | AT5G39000 | 36.393 | 5.37e-45 | 171 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_CrRLK1L-1 | Arst4g03898 | PK_Tyr_Ser-Thr | 3.3e-43 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst4g03898 | - | - | adu:107486597 | 1404.81 |