Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03897 ATGCTTCTCAAGTGTATAAGCTTTCCTGTTTCAAAGAAGACAAGCTCATCCAAGAAGCACTCTCCAACGATTATAGAATTGTTATGCCATCAATTTTCCCTGGAAGATCTTAAAAGATCAACCAACAACTTCAACCAGAGATTAGTAGTTGGAAAAGGAGGTTTTAGCACTGTATACAAAGGATGTCTCAAACACAATGGTGGATCAGACCATACAATTGCATTAAAGCTCAAGTGTTGCAACTCCAACCAGCATTTCCTTGAGTTCATGAAGGAAATTGAGTTGCTATGCCAGCTTCATCATCCTAATTTGATCTCTCTTGTAGGATTTTGCAACCATGAAAAGAAAAAGATTATTGTGTATGAGTTCATGTGCAATGGCTCTCTTCATGATCACCTATACAATAGGGACAAGACACCACTATCATGGCAGAAAAGGCTAGAGATATGTATAGGAATCGCGCGTGGACTACACTACCTTCATGCTGGAGCCAAGCGCTCTATCTTTCATTGTGACATAAAACCTAGTAACATCCTTTTGGATAGCAATATGGTGCCTAAGCTCTCAGACTTTGGGCTTTCATTGCAGGGACCACTATCTACTTCCAAGCCAAAACCAATTGCAGTAGACTATGTTGCAGTCTCACTTGTAGGTACATTTGGATACTTAGCCCCTGAGTGTTTCCAACGCCTGACCGTTACAGATAAATGTGACGTTTACTCGTTTGGTATGGTTCTACTTGTAATGGTATGCATGAAGGAGAAGGATTTGTTTCTTAACAAGGCCAACATGTTAGGTAACCAACATTTGGAGGGGAAGAGTGAAATCAAATACTTGGAAAAGTTCATTGATGATCAAGTTCAACCATGGAATGTAATAGCCTTTATGCAGCGATTCCCAATCGAAGAGATCATTGATCCAACGCTCAGGGGAAAGATTGTACCAGAGTGCTGGGAAGTATTCATGGATGTTACAAAAAGATGTTTGATGCATGAACCTGATGAACGACCAACAATGGGTGAAGTAGAGGTGTTGCTTGAATATGCTTTGTTATTGCAGGCACAAGCAGATATCAAAAGGAACAATGGTTCTTATTCTTTATCATCCACCACCATTATAAACTTAGGTGAAGTCATTTGTATGCATGATATTCATTTAGAAGAGGTGATATTTCATCAGTTTTCTCTAGCCGATCTTAGGCGAACAACCTTCGACTTTGAACGCAGAGTCATCGGCAGAGGAAGCTTTGGTACAGCATACAGAGGTCGTATCTTACTAAATGGAGCTACTTATCATTCAATTGCAATTAAGAAGTTGGATTGGTCATCTACATGTGATAGTGATATACAGTGGAATTTAAAAGATATTGAGAATATTTCCCAACTTCGCCATCCGAATTTGGTCTCTCTTTTTGGATTCTGTGATGAACTTGATGAGAAGATTCTTGTATACATGTATATTCCCAATGGATCTCTCCATTATCACTTAAATTGGAATGAATCAGCTCTAACATGGAAGAAAAGACTAGAAATATGCATTGGAGTAGCAGAAGGATTGAACTACCTTCACACAGCATCAATTTTTCACCATAACATAAAACTCAGCAACATCCTTTTGGATTATGATATGGTGCCCAAACTCTCAGATTTTGGGCTCCCCTGGTCCGAGAAAATTCATGCAGAAGATTATGCTGCTCCGGAGTTGTTACAAGGACATGATTTCACAGATAAATGTGATGTTTATTCCTTTGGTATAATTCTCTTAAAAATGGTATTAACAAACAAGCTACCAATTGTTGAAGGGGTTATTTATCTCAATCTAAAGGGAAAGATTGCACCACAGTGTTGGGAAGTATTCTTGAATGTCATAAAATGCTGTTTGAAGTTTGAAGCAAATGAGAGACCGACAATGAATGAAGTGATAGCTCAACTTCAACATGCCCTGGCACTGCAAGAGGAAGCAGATTCCAACATAAGTGGTGATTACAACTTGTTATCTGTGACCTTTGATCCTCCGGTTGGAGGAAGCATATATTATTAA 2040 0.3887 MLLKCISFPVSKKTSSSKKHSPTIIELLCHQFSLEDLKRSTNNFNQRLVVGKGGFSTVYKGCLKHNGGSDHTIALKLKCCNSNQHFLEFMKEIELLCQLHHPNLISLVGFCNHEKKKIIVYEFMCNGSLHDHLYNRDKTPLSWQKRLEICIGIARGLHYLHAGAKRSIFHCDIKPSNILLDSNMVPKLSDFGLSLQGPLSTSKPKPIAVDYVAVSLVGTFGYLAPECFQRLTVTDKCDVYSFGMVLLVMVCMKEKDLFLNKANMLGNQHLEGKSEIKYLEKFIDDQVQPWNVIAFMQRFPIEEIIDPTLRGKIVPECWEVFMDVTKRCLMHEPDERPTMGEVEVLLEYALLLQAQADIKRNNGSYSLSSTTIINLGEVICMHDIHLEEVIFHQFSLADLRRTTFDFERRVIGRGSFGTAYRGRILLNGATYHSIAIKKLDWSSTCDSDIQWNLKDIENISQLRHPNLVSLFGFCDELDEKILVYMYIPNGSLHYHLNWNESALTWKKRLEICIGVAEGLNYLHTASIFHHNIKLSNILLDYDMVPKLSDFGLPWSEKIHAEDYAAPELLQGHDFTDKCDVYSFGIILLKMVLTNKLPIVEGVIYLNLKGKIAPQCWEVFLNVIKCCLKFEANERPTMNEVIAQLQHALALQEEADSNISGDYNLLSVTFDPPVGGSIYY 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03897 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Arst4g03897 679 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
Arst4g03897 679 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Arst4g03897 679 SMART serkin_6 405 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03897 679 SMART serkin_6 44 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03897 679 ProSiteProfiles Protein kinase domain profile. 405 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03897 679 SUPERFAMILY Protein kinase-like (PK-like) 390 647 IPR011009 -
Arst4g03897 679 ProSiteProfiles Protein kinase domain profile. 44 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03897 679 Pfam Protein tyrosine and serine/threonine kinase 409 644 IPR001245 GO:0004672|GO:0006468
Arst4g03897 679 Pfam Protein tyrosine and serine/threonine kinase 49 343 IPR001245 GO:0004672|GO:0006468
Arst4g03897 679 Gene3D Transferase(Phosphotransferase) domain 1 124 366 - -
Arst4g03897 679 Gene3D Transferase(Phosphotransferase) domain 1 487 667 - -
Arst4g03897 679 Gene3D Phosphorylase Kinase; domain 1 379 486 - -
Arst4g03897 679 ProSitePatterns Protein kinases ATP-binding region signature. 411 438 IPR017441 GO:0005524
Arst4g03897 679 FunFam Receptor-like protein kinase ANXUR2 10 123 - -
Arst4g03897 679 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 124 356 - -
Arst4g03897 679 PANTHER OS07G0166700 PROTEIN 29 353 IPR045272 GO:0004714|GO:0006468
Arst4g03897 679 SUPERFAMILY Protein kinase-like (PK-like) 16 342 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03897 Arst-Chr4 117761456 117764232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03897 392 654 Receptor kinase-like Gene Family AT5G39000 36.393 4.52e-45 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Arst4g03897 PK_Tyr_Ser-Thr 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03897 - - adu:107486597 1368.21