Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03889 ATGGGTTTTCCCTTCTTTTCAGGCTTGTCTTGTTTCGGTGACTCAAGTCAAAGGGTGACAAATCCATCTTCTTCTGATCCCACACTCATCTCAACAGAACCACCTTCATCTATCATAACTGAACTCTGCCATCAGTTTACACTTGCAGAGATACAATCAGTAACAAGAAACTTCGAAAAGTCTTTGGGAGAAAGCAGGTTTGGTATTGTTCACAGAGGCTATGTAGGAAATACTTATAAACCGGTTGCAGTCAAGCAGTATAAGAAGGACTCAGGTTTTGGTTTCTTGGAGTTCAAGAATGAGGTTGTCTTGCTTTCGCAGCTGCACCACCCCAACCTCATCTCTTTGGTTGGGTTTTGCGTCGAAAGAAATGAGTTAATTCTTGTAAATGAGTTGCTTCCTAAGGGTAATCTTTATCATCATCTTCATGGTCGAAACATTCATCCACTTCCATGGAAGAGGAGGCTACAGATTTGCATAGGCGTGGCGCGTGGACTTCATTATCTTCACACTGGAGCCAAGTATACTATCATTCACCGCGACATTAAGACAAATAACATTCTTTTGGATGATAACTGGGAGCCTAAAATTTCAGGTTTAACACTGTCCAAAAGAGTATCTCTTAAGAGCTCAAAGTCATTGAAAAGGACTGAGTCAGATATAAAAGGAACATATGGATATAAAGATCCAGAATATGAAAGAACTGGAGTGCTGACTGAAAAATCAGATGTATATTCTTTTGGGGTAGTTCTGTTAGAAGTTGTAAGTGCAAAGCCGCCGCGGGAGATTTACAGGGAATACTTGGAAGACTGCAATCAGTCTCTCGAGTCATATGCAGAGAAAAATGTTGATCGATTTCTTAAGTCAAAGATTGAACCAGATTGTTGGAAAATATTTGTTGACATCACTGAGAGATGCTTGCTTGCAGAGGGGAGGGAGAGGCCAGACATGGGGGAAGTGGAGGTGGAGCTTCAACATGCACTGCAATTTCAGGAGGAAGCTGATAGAATATGA 1014 0.4132 MGFPFFSGLSCFGDSSQRVTNPSSSDPTLISTEPPSSIITELCHQFTLAEIQSVTRNFEKSLGESRFGIVHRGYVGNTYKPVAVKQYKKDSGFGFLEFKNEVVLLSQLHHPNLISLVGFCVERNELILVNELLPKGNLYHHLHGRNIHPLPWKRRLQICIGVARGLHYLHTGAKYTIIHRDIKTNNILLDDNWEPKISGLTLSKRVSLKSSKSLKRTESDIKGTYGYKDPEYERTGVLTEKSDVYSFGVVLLEVVSAKPPREIYREYLEDCNQSLESYAEKNVDRFLKSKIEPDCWKIFVDITERCLLAEGRERPDMGEVEVELQHALQFQEEADRI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03889 337 FunFam Os07g0541700 protein 133 224 - -
Arst4g03889 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Arst4g03889 337 Gene3D Transferase(Phosphotransferase) domain 1 133 336 - -
Arst4g03889 337 Gene3D Phosphorylase Kinase; domain 1 43 132 - -
Arst4g03889 337 Pfam Protein tyrosine and serine/threonine kinase 58 322 IPR001245 GO:0004672|GO:0006468
Arst4g03889 337 ProSiteProfiles Protein kinase domain profile. 56 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03889 337 PANTHER OS07G0166700 PROTEIN 43 331 IPR045272 GO:0004714|GO:0006468
Arst4g03889 337 SMART serkin_6 56 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03889 337 SUPERFAMILY Protein kinase-like (PK-like) 25 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03889 Arst-Chr4 117713435 117714742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03889 9 335 Receptor kinase-like Gene Family AT3G51550 43.824 1.65e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Arst4g03889 PK_Tyr_Ser-Thr 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03889 - - adu:107486248 397.897