Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03883 ATGAACTATTTTTTCAGCCATTTCCATGTTTATAAATCATCAAACATGATATTATTGTTATTCTTATTAGTTCTTCACCAACAATACTATTTCATCAAACCTATATACTCCTATTCTCGTGTAGAAGATTTAGCAATCAACTGTGGCACTGAATCAAACTCTACTATTGCAGCTAATAAGCGAATTTGGATTGGAGATGCTACCAATTCGAAACACTTTTCTGTCTTAGAATCATCACCACAGAAGAATCAATCTTCAATATCTGTTACTACTCCTCATCATGATCATCCTTATGGCACAGCAAGAATCTCTCGCTATGAATTCACATATTCATTTCATGGTGTCACTCCTGGTCACAAGTTCATTAAGCTTCACTTCAACCCTGCTTCATACAAATCATACCCCAATTTCCATCCTTCTAAGTCCATGTTTTCTGTGAAAGCAGGACCTTATACTCTTCTCAGGGACTTCAATGCTTCAGGTGCTGCTCAAGAACACCGAGATCATCATCATCATAGTGATCCAAACAAGATTCTACTTATTGAGTATCAGCACTGCATAAAAGTTGAACCAGGTCAGAATCTAACCTTGACCTTCATCCCAAACACCACTCATAAAGATTCTTATGCCTTTGTTAATGGGATTGAGGTCATGTCTTTGTTCAAGTACCATGATCAATGCAACAAGCAAAAGGAATCGAGGTTCAGATTTTCTGAGGTAGTTCATCATGAAGAGTCATGCATGAATTGTTCACCATCAGCACAACCACCACCATCGCAGCCACAAAAGCCTGCAATATCTGGTGTTGTTCTTTACTGTGTCATTGCAGTTTCTGTTTTCATTTCGATGTCTTCTATTTTCCTCTTATGTATCTGGGTTTGGAGAAACTCTAGAATGAAGCACAAGGCCAAGATGGAATTGATCTATGAAGAGACAACAAATTCAAGAAAATCATCAATAACCCTGGCCTCAGGGAACTCATGTCGTTGCTTCTCAATCATTGAGATAAGTGCAGCCACCATCAACTTCGATGACATCTTTGTTGTTGGTGTTGGAGGTTTTGGCAAAGTTTACAAAGGCTATATCGATGATGGCACGAAGCCTATCGCCATCAAGCGTTTCATCCCTGAAAATGGTGTGCAAGGTGTTCAAGAGTTCAAGAACGAGGTTGAGATGTTGTCTCAACTTAGCCACCCTCATTTGGTGCCTTTGATTGGTTATTGCAACGACGAAGACGACATGATAATCGTCTATGATTTCATGGCGAATGGGACCCTCCGGGATCATCTGTATGGGACTTGTAATGCACCTCTTTCATGGAAGCAAAGACTTAAGATATGCATAGGGGCAGGGCTAGGATTGGAATATCTCCACAGTGGAGCAAAATTCAAGATCATTCATCGTGATGTGAAGACATCAAATATCTTGTTGGATGAGGAATGGGTGGCTAAGGTTTCTGATTTTGGGTTGTCCAAAATTGGACCAAATGGGGAGTCAAAGTTTCATGTTAGCACAGAGGTTAAGGGTAGTCTTGGATATTTAGACCCTGAATACTCAAAGACTAAGAGGTTGACTCATAAATCTGATGTGTATTCTTTTGGTGTGGTGTTGCTTGAGGTGTTGTGTGGTAGGGCACCTTTGCTTAGAAAAGTTGAGGGACCAAAGAGGTGCCTTGTGGAATGGGCAAGGTCATGCCAAAGTGAGGGACCCCATGCCATTGACCAAATGGTTGATCCGTTTATTAGGGGCAAGATTGTCCAAGAATGTTTGAGCAAGTTTGTTGAGATGGCACTGAATTGTGTTGTTCATGAAGGAAATCAGAGACCATCAATGGGACAAGTGGTGGAGGGACTTGAACTTGCCTTGCAGCTTCAACTAAGATCAGAAGACTGA 1893 0.4083 MNYFFSHFHVYKSSNMILLLFLLVLHQQYYFIKPIYSYSRVEDLAINCGTESNSTIAANKRIWIGDATNSKHFSVLESSPQKNQSSISVTTPHHDHPYGTARISRYEFTYSFHGVTPGHKFIKLHFNPASYKSYPNFHPSKSMFSVKAGPYTLLRDFNASGAAQEHRDHHHHSDPNKILLIEYQHCIKVEPGQNLTLTFIPNTTHKDSYAFVNGIEVMSLFKYHDQCNKQKESRFRFSEVVHHEESCMNCSPSAQPPPSQPQKPAISGVVLYCVIAVSVFISMSSIFLLCIWVWRNSRMKHKAKMELIYEETTNSRKSSITLASGNSCRCFSIIEISAATINFDDIFVVGVGGFGKVYKGYIDDGTKPIAIKRFIPENGVQGVQEFKNEVEMLSQLSHPHLVPLIGYCNDEDDMIIVYDFMANGTLRDHLYGTCNAPLSWKQRLKICIGAGLGLEYLHSGAKFKIIHRDVKTSNILLDEEWVAKVSDFGLSKIGPNGESKFHVSTEVKGSLGYLDPEYSKTKRLTHKSDVYSFGVVLLEVLCGRAPLLRKVEGPKRCLVEWARSCQSEGPHAIDQMVDPFIRGKIVQECLSKFVEMALNCVVHEGNQRPSMGQVVEGLELALQLQLRSED 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03883 630 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Arst4g03883 630 FunFam FERONIA receptor-like kinase 43 220 - -
Arst4g03883 630 Gene3D Phosphorylase Kinase; domain 1 302 420 - -
Arst4g03883 630 Gene3D - 44 220 - -
Arst4g03883 630 PANTHER OS07G0166700 PROTEIN 327 625 IPR045272 GO:0004714|GO:0006468
Arst4g03883 630 Pfam Protein tyrosine and serine/threonine kinase 349 617 IPR001245 GO:0004672|GO:0006468
Arst4g03883 630 FunFam receptor-like protein kinase FERONIA 304 420 - -
Arst4g03883 630 ProSiteProfiles Protein kinase domain profile. 343 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03883 630 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Arst4g03883 630 SMART serkin_6 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03883 630 Pfam Malectin domain 43 166 IPR021720 -
Arst4g03883 630 CDD STKc_IRAK 358 619 - -
Arst4g03883 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Arst4g03883 630 SUPERFAMILY Protein kinase-like (PK-like) 319 622 IPR011009 -
Arst4g03883 630 FunFam Receptor-like protein kinase FERONIA 421 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03883 Arst-Chr4 117701325 117703450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03883 313 630 Receptor kinase-like Gene Family AT3G51550 59.119 5.62e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Arst4g03883 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03883 - - adu:107486605 1268.83