Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03858 ATGGCTTCAAACAATGGGCGCAGCGCAAGTGAGAGCTTTAAAGCTCAAGCACTTGTTTATAGGCACATGTTTAGCATCCTAGACTCCATGTGTCTCAAGTGGATTATTGACTCTCGCATACCAAACATAATCCACGACCATGGAAAACCTATTACTCTTTTAGAATTGGTCTCAGTTCTCCAAATTCCGTCAACTAAAGTTGATCGCATTGATGTTTTCATGCGCTACATGGCATATATTGGATACTTTGATATAGTTAGAATCCAAGATGGCAATCAAGAAGAAGAAAAGGAAGCATTTGCTCTCACAGCAGCATCAAAACTCTTGATCAAAGGCACTGAAAACCCTTGTATATCTCCAGTGGTTGAGTTCGTTATAGATCCAGTTCATTCAGATTCCTTCAATTATCTGAGCAAATGGTTTTCCGACGAAAATCTCCGTCTATACGAAATCACCTTGGGAAAACCTTTGTGGGAGTATCTTGACAAGAACCCTAGACTCATGGGCTTGTTCAATGATGCTATGGCCAGTGATTCTCAGATGATAAAATTGGCACTAAAGGATCATCACATGGCCTTTGAAGGGTTGGAAACAATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCTCAAATTTTCAGTGAGAAATTTCCAGAACTCAAATACATAGTATTTGATCTTCCACAGGTTGTGAAAAATTTGAAGGGATGCAACAATTTGAGCTTTCTTGGTGGAGACATGTTTGAATCCATTCCTAAGGCTGATGCAATTCTACTTAAGCTAGTCTTACATAATTGGAGCGACAACAATTGTATAAAAATATTGAGAAACTGCAAAGATGCTGTTAAGGTTTCAAGCAAGAATAAAAAGGGTAAAATAATAATTTTAGAGACCGTGATAAATGAAGAACAAGATGAACCTGAAATTACTCGGCTCAAATTTCTTATGAACATAAATATGCAAATTATTCACGGAAAAGAGAGAACCGAAGAAGAATGGAAAAATATCTTTCATGAAGCTGGCCTCTATGATTATAAGATATTTTCATTTACTGGATATTTATCACTTATAGAGATCTATCCTTAA 1086 0.372 MASNNGRSASESFKAQALVYRHMFSILDSMCLKWIIDSRIPNIIHDHGKPITLLELVSVLQIPSTKVDRIDVFMRYMAYIGYFDIVRIQDGNQEEEKEAFALTAASKLLIKGTENPCISPVVEFVIDPVHSDSFNYLSKWFSDENLRLYEITLGKPLWEYLDKNPRLMGLFNDAMASDSQMIKLALKDHHMAFEGLETIVDVGGGTGTTAQIFSEKFPELKYIVFDLPQVVKNLKGCNNLSFLGGDMFESIPKADAILLKLVLHNWSDNNCIKILRNCKDAVKVSSKNKKGKIIILETVINEEQDEPEITRLKFLMNINMQIIHGKERTEEEWKNIFHEAGLYDYKIFSFTGYLSLIEIYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03858 361 CDD AdoMet_MTases 198 300 - -
Arst4g03858 361 PANTHER O-METHYLTRANSFERASE 16 346 IPR016461 GO:0008168
Arst4g03858 361 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Arst4g03858 361 FunFam O-methyltransferase ZRP4 112 361 - -
Arst4g03858 361 Pfam O-methyltransferase domain 134 341 IPR001077 GO:0008171
Arst4g03858 361 Gene3D Vaccinia Virus protein VP39 112 361 IPR029063 -
Arst4g03858 361 Gene3D - 1 109 IPR036388 -
Arst4g03858 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Arst4g03858 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Arst4g03858 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Arst4g03858 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03858 Arst-Chr4 117400140 117402836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03858 70 361 Monolignol Biosynthesis Gene Families AT1G51990 30.405 1.92e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03858 K22588 - ahf:112740688 457.988