Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03857 ATGACTTCAAACAATGGCCGCAGCGCAAGTGAGAGCTTCAAAGCTCAAGCACTTGTTTATAGGCACATGTTTAGCATTCTAGACCCCATGTGTCTCAAGTGGATTATTGATTCTCGCATACCAAACATAATCCACGACCATGGAAAACCCATTACTCTTTTAGAATTGGTCTCCATTCTCAAAATTCCGTCAACTAAAGTTGATCGCATTGATGTTTTCATGCGCTACATGGCGTATATTGGATACTTTGATATCACAAAGGTTAGAATCCATGATGGCAATAAAGAAGTAGAAAAGGAAGCATTTGCTCTCACAGCAGCATCAGAACTCTTGATCAAAGGCACTGAAAACCCTTGTATATCTCCATTGGTTGAGTTCGTTATGGATCCACTTATTTCAGATTCCTTTAATTATCTGAGCAAGTGGTTTTCCGACGAAGATCGCCGTCTATATGAGATCACCTTGGGAAAACCTTTGTGGGAGTTTCTTGACAAGAATCCAAGACTCTTGGGTTTGTTTAATGACGCTATGGCCGGTGATTCTCAGATGATAAAGTTGGCACTAAAGGATCACAACATGGTCTTTGAGGGGTTGGAAACAATTGTGGATGTTGGTGGTGGAATTGGAACCACCGCTCTAATTATCAGTGAGAAATTTCCAGCACTCAAATGTATAGTATTTGATCTTCCACAGGTTGTGAAAAATTTGAAGGGATGCAACAATTTAAGCTTTGTTGGTGGAGACATGTTTGAATTCATTCCTAAGGCTGATGCAATTCTACTTAAGCTAGTCTTACATAATTGGAGTGACGACAATTGCATCAAAATATTGAAAAACTGCAAAGATGCTGTTAAGGTTTCAAGCAAGGATAAAAAAGGTAAAATAATAATTTTAGAGACCGTGATAAATGAAGAACAAGATGAACCTGAAATTACTCGACTCAAATTTCTTATGAGCATAAATATGCAAATTATTCATGGAAAAGAGAGAACCAAAGAAGAATGGAAAAATATCTTTTATGAAGCTGGTCTCTATAATTATAAGATATTTCCATTTACTGGATATTTATCACTTATAGAGGTCTATCCTTAA 1092 0.3709 MTSNNGRSASESFKAQALVYRHMFSILDPMCLKWIIDSRIPNIIHDHGKPITLLELVSILKIPSTKVDRIDVFMRYMAYIGYFDITKVRIHDGNKEVEKEAFALTAASELLIKGTENPCISPLVEFVMDPLISDSFNYLSKWFSDEDRRLYEITLGKPLWEFLDKNPRLLGLFNDAMAGDSQMIKLALKDHNMVFEGLETIVDVGGGIGTTALIISEKFPALKCIVFDLPQVVKNLKGCNNLSFVGGDMFEFIPKADAILLKLVLHNWSDDNCIKILKNCKDAVKVSSKDKKGKIIILETVINEEQDEPEITRLKFLMSINMQIIHGKERTKEEWKNIFYEAGLYNYKIFPFTGYLSLIEVYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03857 363 CDD AdoMet_MTases 200 302 - -
Arst4g03857 363 Gene3D Vaccinia Virus protein VP39 115 363 IPR029063 -
Arst4g03857 363 Pfam O-methyltransferase domain 136 343 IPR001077 GO:0008171
Arst4g03857 363 Gene3D - 1 111 IPR036388 -
Arst4g03857 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 363 IPR016461 GO:0008168
Arst4g03857 363 PANTHER O-METHYLTRANSFERASE 16 347 IPR016461 GO:0008168
Arst4g03857 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
Arst4g03857 363 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Arst4g03857 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Arst4g03857 363 FunFam O-methyltransferase ZRP4 114 363 - -
Arst4g03857 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03857 Arst-Chr4 117370275 117372726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03857 29 361 Monolignol Biosynthesis Gene Families AT5G54160 27.616 2.19e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03857 K22588 - ahf:112740688 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03857 4 117370275 117372726 Arst4g03857 4 117370275 117372726 ECH