Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03856 ATGACTTCAAACAATGGGCGCAGCACAAGTGAGAGCTTCAAAGCTCAAGCACTTGTTTATAGGCATATGTTTAGCATCCTAGACTCCATGTGTCTCAAGTGGATCATTGACTCTCGCATACCAAACATAATTCACGACCATGGAAAACCCATTACTCTTTTAGAATTGGTCTCCATTCTCAAAATTCCATCAACTAAAGTTGATCGCATTGATGTTTTCATGCGCTACATGACGTATATTGGATACTTTGATATAACAAAGGTTAGAATTCATGGCGACAATGATGGCAATAATCAAGAAGAAGAAAAAGAAGCATTTGCTCTCACAGCAGCATCTGAACTCTTGGTCAAAGGCACTGAAAACCCTTGTATATCTCCAATGGTGGAGTTTGTATTAGATCCAGTTCATTCAGATTTTTTCAATTATCTGAGCAAGTGGTTTTCAGACGAAAATCGCCGTCTATACGAAATTACTTCGGGGACACCTTGGTGGGAGTTGCTTGACAAGAATCCAAGACTCTTGGGCTTGTTCAATGACGCTATGGCCGGTGATTCTCAGATGATAAAACTGGCACTAAAGGATCACAACATGGCCTTTGAGGGGTTGGAAACAATTGTGGATGTTGGTGGTGGAACTGGAACCACCGCTCAAATTTTCAGTGAGAAATTTCCAGAACTCAAATACATAGTATTTGATCTTCCACAGGTTGTGAAAAATTTGAAGGGATGCAATAATTTGAACTTTGTTGGTGGAGACATGTTTGAATCCATTCCTAAGGCTGATGCAATTCTACTTAAGTCAGTCTTACATAATTGGAGTGATGACAATTGCATAAAAATATTGAGAAACTGTAAAGATGCTGTTAAAGTTTTAAGCAAAGATAGAAAAGGTAAAATAATAATTTTAGAAACCGTGATAAACGAAAAACAAGATGAACCTGAAATTACTCGACTCAAATTTCTTATGAATATAAATATGCAAATTATGCACGGAAAAGAGAGAAGCGAAGAAGAATGGAAAAATATCTTTCATGAAGCTGGCCTCTATGATTATAAGATATTTTCATTTACTGGATATTTATCATTAATAGAAGTCTATCCTTAA 1104 0.3668 MTSNNGRSTSESFKAQALVYRHMFSILDSMCLKWIIDSRIPNIIHDHGKPITLLELVSILKIPSTKVDRIDVFMRYMTYIGYFDITKVRIHGDNDGNNQEEEKEAFALTAASELLVKGTENPCISPMVEFVLDPVHSDFFNYLSKWFSDENRRLYEITSGTPWWELLDKNPRLLGLFNDAMAGDSQMIKLALKDHNMAFEGLETIVDVGGGTGTTAQIFSEKFPELKYIVFDLPQVVKNLKGCNNLNFVGGDMFESIPKADAILLKSVLHNWSDDNCIKILRNCKDAVKVLSKDRKGKIIILETVINEKQDEPEITRLKFLMNINMQIMHGKERSEEEWKNIFHEAGLYDYKIFSFTGYLSLIEVYP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03856 367 CDD AdoMet_MTases 204 306 - -
Arst4g03856 367 Pfam O-methyltransferase domain 140 347 IPR001077 GO:0008171
Arst4g03856 367 PIRSF O-mtase 1 367 IPR016461 GO:0008168
Arst4g03856 367 FunFam O-methyltransferase ZRP4 118 367 - -
Arst4g03856 367 Gene3D Vaccinia Virus protein VP39 118 367 IPR029063 -
Arst4g03856 367 SUPERFAMILY "Winged helix" DNA-binding domain 9 118 IPR036390 -
Arst4g03856 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 367 IPR016461 GO:0008168
Arst4g03856 367 Gene3D - 1 115 IPR036388 -
Arst4g03856 367 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Arst4g03856 367 PANTHER O-METHYLTRANSFERASE 18 352 IPR016461 GO:0008168
Arst4g03856 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 366 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03856 Arst-Chr4 117355410 117358276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03856 30 365 Monolignol Biosynthesis Gene Families AT5G54160 28.446 2.66e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03856 K22588 - ahf:112740688 497.278