Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03853 ATGGATGAACAACATCATAAAAGGATCTTTGTTGTTCTTCATCAAGTGGTGGTGATTTTGTTGGTGATGGTGGTGGTGGTGGGACCAAGTAGTTGTGTTAAAGGAGGAGAAGAAGAAGATAGGATCTTGGAACTTCCTGGTCAACCAAAGGTGTCTTTTCAACAGTTTTCTGGCTATGTTACTGTCAACAAGGTTGCCGGTAGAGCACTCTTCTACTGGCTCACTGAATCTTCTCAAAACTCACTCAGAAAACCCCTTGTTATTTGGCTCAATGGAGGTCCCGGTTGTTCATCAGTAGCATATGGAGCTTCTGAAGAGATTGGCCCATTCAGAGTAAATAGGTCTGCTTCAGGACTATACATTAACAAGTTTTCATGGAACTCACTCGCTAACCTCCTATTCCTCGAAACCCCCGCCGGCGTCGGCTTCTCATACACCAACCGCTCCTCCGACCTACATGACACCGGCGACCGCCGCACCGCAAAAGACTCTCTGGAATTTGTAGTCCAATGGCTAGAAAGGTTCCCACGCTATAAAAATAGGGAGCTTTACATCACTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAACTAGCTAGAGAAATTATCACTTATAACACCAACACTAAGTATCCCATCAATCTCAAAGGAATCATGGTTGGAAATGCAGTAACAGACAACTATTATGACAACTTAGGAACAGTGACATATTGGTGGAGCCATGCAATGATCTCTGACCAGACTTACAGGCAACTCATAAGCACTTGTGACTTCCACAGGCAGAAGGAATCTGATGAGTGTGAGTCTCTATATAGTTATGCCATGGATCAAGAATTCGGAAACATTGATCAGTACAACATCTATGCACCTCCTTGTAACAACTCCGACGGCAGCGCCGCCACCTCCCGCCGTGCCATGCGCCTACCCCATCGCCCCCATCATCCGGCAGTCAGGCAATTGTCCGGGTATGATCCATGTACGGAAAAGTATGCAGAGATATACTACAATAGACCAGATGTTCAGAAAGCACTTCATGCTAACACTACTGGAATTCCTTATAAGTGGACTGCTTGCAGTGAGGTTTTGAATCGAAACTGGAATGATACAGATGTATCAGTGCTACCAATTTATAGACAGTTGATGGCCAACAGAATACGAGTTTGGGTGTTCAGTGGAGACGTAGATTCAGTGGTGCCGGTTACAGCAACTAGATATGCACTTGCACAGCTTAAGGTGGCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGGTGGACTGAAGTATATGAAGGGCTAACATTTGCGACAGTGAGAGGGGCAGGTCATGAAGTTCCATTATTCAAGCCAAGAGCAGCTCTTCAGTTATTTAAATCATTTCTTTCAGGAAGTCCTCTCCCTAAGTCCTAA 1422 0.4501 MDEQHHKRIFVVLHQVVVILLVMVVVVGPSSCVKGGEEEDRILELPGQPKVSFQQFSGYVTVNKVAGRALFYWLTESSQNSLRKPLVIWLNGGPGCSSVAYGASEEIGPFRVNRSASGLYINKFSWNSLANLLFLETPAGVGFSYTNRSSDLHDTGDRRTAKDSLEFVVQWLERFPRYKNRELYITGESYAGHYVPQLAREIITYNTNTKYPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLISTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSAATSRRAMRLPHRPHHPAVRQLSGYDPCTEKYAEIYYNRPDVQKALHANTTGIPYKWTACSEVLNRNWNDTDVSVLPIYRQLMANRIRVWVFSGDVDSVVPVTATRYALAQLKVATKIPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLSGSPLPKS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03853 473 ProSitePatterns Serine carboxypeptidases, histidine active site. 437 454 IPR033124 GO:0004185
Arst4g03853 473 FunFam Carboxypeptidase 373 467 - -
Arst4g03853 473 FunFam Carboxypeptidase 36 294 - -
Arst4g03853 473 Gene3D - 326 363 - -
Arst4g03853 473 Gene3D - 373 467 - -
Arst4g03853 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Arst4g03853 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Arst4g03853 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Arst4g03853 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Arst4g03853 473 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Arst4g03853 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 454 IPR001563 GO:0004185|GO:0006508
Arst4g03853 473 Pfam Serine carboxypeptidase 47 467 IPR001563 GO:0004185|GO:0006508
Arst4g03853 473 FunFam Carboxypeptidase 322 470 - -
Arst4g03853 473 Gene3D alpha/beta hydrolase 36 294 IPR029058 -
Arst4g03853 473 SUPERFAMILY alpha/beta-Hydrolases 44 471 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03853 Arst-Chr4 117270251 117279137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03853 331 470 Calmodulin-binding Proteins AT2G22960 31.915 3.36e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03853 K16297 - gmx:100807680 827.394