Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst4g03791 | ATGATCAATTACCTTACCAAGAATTTTATTCGAAACTTGGTATCTAAGCAACGGAGACGGATGCTCATTGCCGGCTATGATCTTGACATGACATACATCACAGATAGAATATTGGCAATGTCATTTCCTGCGGAACGAATGCGAGCAGTGTATCGAAATCCTCTATGGCAGGTGAAATCTGTGTTGGACATGACACACCATGAACATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCGGCAAACTTTCATGGACGTGTCGAAGCATACCCTTTCGATGATAACCATGTACCGCCCCTTGAAATGATCAAAGATTTTTGTGAAAGTGTGCATTCATGGCTATCAAGTGATCCAAGAAATATTGCTGTCATTCATTGCATGGCAGGGAAGGGTAGAACTGGCTTAATGGTGTGTTCATACCTAACTTATTCTGGCATGACAGCAGATGAGGCTCTTCAATTGTATGCAGAGAGAAGGACAACAAATAATGAAGGAGTATCAATACCAAGCCAACGCCGTTATGTAAGGTACTTTGAAAGTGTACTTTCTACCCCTAGGGGCAGAGTGAGCTTGCCTCAACCATGTAGCAGAGAATTGCGCCGAATTCGCCTTTATGATACAGTTAACATCTGTGCAATATTCTTTGTGATTTCAGAGCTGCAGGAGGAGGCTCCTAACCAGTGCTATCGTCCGCCGGTGGAAATTTTCCGAGGGTGCTGCAGAGAGATTAAGAAAGGCTATCAGAGAACCAACAGTCCTCGCTACTATCTTTCTTATATCGAAGAAGAAAATGAAGATGGAACACAATCAGAACAAGAAGAACCTCGGATTGTTGTTCAAATGGACACAGAGAGTCCTGCAATATACAAGAAAACCTGTTTGGATTATTATTTCGACCAACCGATCCTATTAACTGGAGATGTACGTGTGATATTCTATGAGAAAATGATAGGAGGCCGTCTCTTCTATTGTTGTTTCAATACAGCTTTTGTTAAGAACAGCATGGTACAGCTGGGAATACAGGATTTGGACAAAGTTGGGAAGAAAGGAAGATCAATATGTGGAAGTGATTTTAGCTTGGAATTACTGTTTGGTCCTGCCAATTCATCAAGTGTATCCAATAGTGACAATGCTAGTATTGTTTCCTTGTGA | 1161 | 0.41 | MINYLTKNFIRNLVSKQRRRMLIAGYDLDMTYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMTHHEHYKIYNLCIEESYDPANFHGRVEAYPFDDNHVPPLEMIKDFCESVHSWLSSDPRNIAVIHCMAGKGRTGLMVCSYLTYSGMTADEALQLYAERRTTNNEGVSIPSQRRYVRYFESVLSTPRGRVSLPQPCSRELRRIRLYDTVNICAIFFVISELQEEAPNQCYRPPVEIFRGCCREIKKGYQRTNSPRYYLSYIEEENEDGTQSEQEEPRIVVQMDTESPAIYKKTCLDYYFDQPILLTGDVRVIFYEKMIGGRLFYCCFNTAFVKNSMVQLGIQDLDKVGKKGRSICGSDFSLELLFGPANSSSVSNSDNASIVSL | 386 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst4g03791 | 386 | ProSiteProfiles | C2 tensin-type domain profile. | 214 | 370 | IPR014020 | - | |
| Arst4g03791 | 386 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 258 | 369 | IPR035892 | - | |
| Arst4g03791 | 386 | Gene3D | - | 246 | 372 | - | - | |
| Arst4g03791 | 386 | Pfam | Tyrosine phosphatase family | 121 | 164 | IPR026893 | GO:0004721 | |
| Arst4g03791 | 386 | Gene3D | Protein tyrosine phosphatase superfamily | 5 | 188 | IPR029021 | - | |
| Arst4g03791 | 386 | Pfam | C2 domain of PTEN tumour-suppressor protein | 293 | 367 | IPR014020 | - | |
| Arst4g03791 | 386 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 7 | 378 | - | - | |
| Arst4g03791 | 386 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN | 6 | 188 | - | - | |
| Arst4g03791 | 386 | CDD | PTP_PTEN | 29 | 182 | IPR045101 | GO:0016791 | |
| Arst4g03791 | 386 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 127 | 137 | IPR016130 | GO:0016311|GO:0016791 | |
| Arst4g03791 | 386 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 19 | 188 | IPR029023 | - | |
| Arst4g03791 | 386 | SMART | PTEN_C2_2 | 195 | 369 | IPR014020 | - | |
| Arst4g03791 | 386 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 107 | 162 | IPR000387 | GO:0016311|GO:0016791 | |
| Arst4g03791 | 386 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 25 | 186 | IPR029021 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst4g03791 | Arst-Chr4 | 116732554 | 116736215 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst4g03791 | 1 | 372 | Protein tyrosine phosphatase (PTP) family | AT5G39400 | 67.905 | 0.0 | 544 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst4g03791 | K01110 | - | gmx:100809938 | 632.869 |