Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03717 ATGGAGGGGATGTTGAGCCTCAACACTGAAGCAAGTAATGATGCAAATCCCAAGCAACAATCCTCTTCTCTTGCAAATTTTGCAAAGAATTATCCTCCTAGCTTTCCTAGAAAGGTATTGGCAGAGATAATAGGGACATATTTATTGGTGTTTGTGGGAAGTGGTTCAGCTGGACTTAGTGCCATTGATGAAAACAAGGTATCAAAATTGGGAGCTTCACTTGCAGGAGGATTCATTGTAACGGTTATGATCTACTCCATTGGACACATCTCCGGGGCACATATGAATCCAGCTGTTTCCTTAGCTTTTGCCTCCATCAACCGTTTTCCTTGGAAGCAGGTACCATTTTATATTGCAGCCCAACTAACAGGAGCAATATGTGCTTCATACACACTGAGGGTGTTGCTAGAACCAGCAACACAAATTGGTGCCACGTCACCCTCAGGGTCAAACATTCAAGCACTTGTCATGGAAATTGTTGCCACATTCACTATGGTCTTCATATCCGCTGCTGTTGCCACTGACCCTAAAGCTATTGGAGAACTATCAGGGGTAGCAGTAGGTTCTTCAGTTAGCATAGCTAGCATTGTAGCTGGACCAATATCAGGGGGGTCAATGAACCCAGCAAGGTCATTAGGTCCTGCAATTGCCACTGCATCTTATAAGAGTATTTGGGTCTATTTTGTTGGACCAATCATTGGGGCACTCTTAGGGGTATGGTCCTACACTGTGGTTCAAGACATAGATAATAATAATAAGCCACCTCCTTCTTCTTCCCTTTCATCAATATTGGGCCAGAGAATTATTAGTAGTGAAGCTGAGCATGTTGCTAACAAATATCACTTCAGTTCTGTGTGA 858 0.4324 MEGMLSLNTEASNDANPKQQSSSLANFAKNYPPSFPRKVLAEIIGTYLLVFVGSGSAGLSAIDENKVSKLGASLAGGFIVTVMIYSIGHISGAHMNPAVSLAFASINRFPWKQVPFYIAAQLTGAICASYTLRVLLEPATQIGATSPSGSNIQALVMEIVATFTMVFISAAVATDPKAIGELSGVAVGSSVSIASIVAGPISGGSMNPARSLGPAIATASYKSIWVYFVGPIIGALLGVWSYTVVQDIDNNNKPPPSSSLSSILGQRIISSEAEHVANKYHFSSV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03717 285 CDD MIP 37 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 SUPERFAMILY Aquaporin-like 32 247 IPR023271 -
Arst4g03717 285 PANTHER AQUAPORIN NIP2-1 13 248 IPR034294 -
Arst4g03717 285 NCBIfam MIP family channel protein 41 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Arst4g03717 285 Pfam Major intrinsic protein 34 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst4g03717 285 Gene3D Glycerol uptake facilitator protein. 5 255 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03717 Arst-Chr4 116138782 116142164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03717 37 250 Major Intrinsic Protein MIP AT5G37820 50.000 2.23e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03717 K09874 - gmx:100795261 337.806