Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03698 ATGGCATTCCCACCACCACCCTCTTCACAAAGTGCTAATAATTTCATCTTCCACAATCATGAACACCAACCAGATCATCATCATCATCATCATCACCAACCCTTCTCTTCTAACTCCCTCAATTCCTTCCCCTCTTTGCCAATTCCTTCCCATCACCACTTCTTAGGTCAACCACACAACACACCCTCTCTCTTTCTCAAGATGGGTTCACACCAATTCTTAGGGATCGAGAACAAGTGCGGCGGCGACGGCGACGACGACCTATCGGATGACGGATTCGGGTTCCAATTTGGGGAGAAGAAAAAGAGGCTGAACATTGAACAAGTGAAAGCACTTGAGAAGAGTTTTGAGTTAGGGAACAAGCTTGAACCTGAAAGAAAGGTTCAACTTGCTAAGGCCCTTAACTTGCAACCGAGACAAATTGCTATTTGGTTTCAGAATCGGAGGGCAAGGTGGAAGACTAAGCAACTTGAAAGGGAATATGAATCTCTTAAGAAGCAGTTTGAAGCATTGAAGGTTGATAATGATGCACTTAAGGTTCAGAATCAGAAATTACATGCTGAGTTACAGGCCCTAATCAAAGGAAAGGAGTATTATTGTGAAGAAGATGGAGCAATAATAAGCAACCTTAATAAGAAAGAAGCTGGAGAGGGTTCATGGAGTAATAATAATAATAATAATAATGGTTGCAGTGACAATAATAATATTTCATCTTCAGACATTAACTTAGATCTCTCAACAACACCAATTATAAACACTAGTCCAGTATCTTCTCAAAATGCCAAAACTACCCTTGAATCCAATAATGATAATTCTCTAAAGCCCAACAACAACATAATTCAGCTCCTCCAATACTCACCATCATCATCATCAAGACCACAAGGGATTCCTCATCAAGATGAAGGCTTATGCAACATGTTTCATCACCAAATTGAGGATCAACAGAATCTGTGGCCCTGGCCTGAACACCAGCCTCATAATAATTTCCACTGA 993 0.4079 MAFPPPPSSQSANNFIFHNHEHQPDHHHHHHHQPFSSNSLNSFPSLPIPSHHHFLGQPHNTPSLFLKMGSHQFLGIENKCGGDGDDDLSDDGFGFQFGEKKKRLNIEQVKALEKSFELGNKLEPERKVQLAKALNLQPRQIAIWFQNRRARWKTKQLEREYESLKKQFEALKVDNDALKVQNQKLHAELQALIKGKEYYCEEDGAIISNLNKKEAGEGSWSNNNNNNNGCSDNNNISSSDINLDLSTTPIINTSPVSSQNAKTTLESNNDNSLKPNNNIIQLLQYSPSSSSRPQGIPHQDEGLCNMFHHQIEDQQNLWPWPEHQPHNNFH 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03698 330 MobiDBLite consensus disorder prediction 21 42 - -
Arst4g03698 330 CDD homeodomain 100 156 IPR001356 GO:0003677
Arst4g03698 330 ProSitePatterns 'Homeobox' domain signature. 130 153 IPR017970 GO:0000981|GO:0006355
Arst4g03698 330 Coils Coil 147 188 - -
Arst4g03698 330 SMART HOX_1 98 159 IPR001356 GO:0003677
Arst4g03698 330 MobiDBLite consensus disorder prediction 252 275 - -
Arst4g03698 330 FunFam Homeobox-leucine zipper protein ATHB-13 90 159 - -
Arst4g03698 330 ProSiteProfiles 'Homeobox' domain profile. 95 155 IPR001356 GO:0003677
Arst4g03698 330 Pfam Homeodomain 100 153 IPR001356 GO:0003677
Arst4g03698 330 Gene3D - 96 164 - -
Arst4g03698 330 Pfam Homeobox associated leucine zipper 155 192 IPR003106 GO:0006355|GO:0043565
Arst4g03698 330 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 85 319 IPR045224 GO:0003700
Arst4g03698 330 SUPERFAMILY Homeodomain-like 91 157 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03698 Arst-Chr4 115874158 115877260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03698 85 322 Homeobox Transcription Factor Family AT5G15150 51.029 4.73e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst4g03698 Homeodomain 7.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03698 K09338 - gmx:100816097 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03698 4 115874158 115877260 Arst4g03698 4 115874158 115877260 ECH
Arst10g02969 10 97400493 97403234 Arst4g03698 4 115874158 115877260 PCT