Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03675 ATGGGTTACCTGAGCAAAACTTCAAGGACTCTAAGGCAATCAAATTACCTCTCTTTATTACGAAATTCAACCTTTTTCCCATTCAACTCATTAAGCAGCACCACCTTTCATCACCAACAGCGTGCACTCTTGTGTTCTCAGTCGCGGCAACAGAACATTAAGGATAAGAGCGCCATAGATTTGAGCCAGTACCCTCCTGAACTCATTCGAAATTTCTCAATCATTGCGCATGTTGATCATGGCAAGTCTACCCTCGCTGATCGACTCCTTGAACTCACTGCTACCATTAAAAAGGGACATGGCCAGCCCCAATATCTTGATAAGTTGCAGGTGGAGAGAGAAAGGGGAATCACAGTTAAAGCACAGACAGCAACAATGTTCTATAAGCACAGGACAAATGGTGATGATCATAGTGACGGAAAGGATTCACCTAGTTTTTTGCTGAATCTTATTGACACTCCCGGTCATGTGGATTTTAGCTATGAGGTGTCAAGGTCACTAGCAGCTTGTCAAGGCGTACTTTTGGTTGTTGATGCCGCGCAAGGAGTCCAAGCGCAAACTGTTGCTAATTTCTACCTTGCTTTTGAGGCCAACCTGACAATTGTACCTGTAATAAACAAGATTGACCAGCCAACTGCTGATCCTGATCGCGTTAAAGCCCAATTGAAATCAATGTTTGATCTTGACCCTAGTGATGCATTGCTAACATCTGCTAAAACTGGAAAGGGTCTTGAACAAGTCCTTCCAGCTGTTATAGAGCGCATCCCTCCTCCTCATGGTATACTACGCAAGGGGGATAAGATTTCATCTGCTGCTACTGGTCAGTCATATGAAGCTTTGGATATTGGTATCATGCATCCTGAGCTTACACCTACTGGAATCTTGCTTACTGGTCAAGTTGGTTATGTTGTAAGTGGCATGCGTTCAACAAAAGAAGCCCGTGTTGGAGATACAATTTACCATACTCGAAACACTGTAGAGCCTCTCCCAGGATTTAAACCAGCAAAACATATGGTTTTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCACTCAACCATGCAATAGAGAGGCTGACATGTAATGATGCCAGTGTCTCTATTACTAAAGAAACTAGCACAGCTCTAGGTTTGGGTTTCAGGTGTGGATTTCTGGGTTTACTTCACATGGATGTTTTTCATCAACGGCTTGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCTACTGTGCCTTATATATTTGAATATTCTGATGGAAGCAAATTAGAAGTTCAGAATCCTGCTACGTTACCCTCTAATCCCAAGCAACGAGTGACAGCATGTTGGGAACCTACAGTATTAGCTACTATAATCATTCCTAGTGAGTATGTGGGACCAGTTATCACCCTTTGCTCGGAGCGTAGGGGTCAGCAGTTGGAGTACTCATTCATTGACAGTCAACGGGCATTCATGAAGTATCGCATGCCTTTGAGAGAAATTGTTGTCGACTTCTATAATGAATTGAAGAGCATAACATCAGGCTATGCATCATTTGATTATGAGGATGCAGATTATCAGCAATCTGATCTGGTGAAACTCGATATCCTCTTAAATGGACAACCTGTTGATGCAATGTCAACTATTGTTCATAACATGAAAGCATATCGCGTTGGGCGTGAGCTAGTAGAGAAATTGAAGAAAGTCATAGACAGGCAAATGTTTGAGATAACGATACAAGCTGCCATTGCTTCAAAGATTATAGCAAGAGAGACGATTTCTGCGATGAGGAAGAATGTTCTTGCAAAGTGTTACGGTGGCGATGTTACTCGAAAGCGAAAGCTGTTGGAAAAGCAAAAGGAAGGAAAGAAGCGAATGAAACGCATTGGCTCCGTTGATATACCGCAGGAAGCATTCCATGAATTATTGAAGGTTTCATAG 1929 0.4251 MGYLSKTSRTLRQSNYLSLLRNSTFFPFNSLSSTTFHHQQRALLCSQSRQQNIKDKSAIDLSQYPPELIRNFSIIAHVDHGKSTLADRLLELTATIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHRTNGDDHSDGKDSPSFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFEANLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDALLTSAKTGKGLEQVLPAVIERIPPPPXGILRKGDKISSAATGQSYEALDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRNTVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLEVQNPATLPSNPKQRVTACWEPTVLATIIIPSEYVGPVITLCSERRGQQLEYSFIDSQRAFMKYRMPLREIVVDFYNELKSITSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMSTIVHNMKAYRVGRELVEKLKKVIDRQMFEITIQAAIASKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRIGSVDIPQEAFHELLKVS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03675 643 SUPERFAMILY EF-G C-terminal domain-like 447 541 IPR035647 -
Arst4g03675 643 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 107 122 IPR031157 -
Arst4g03675 643 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 67 259 IPR000795 GO:0003924|GO:0005525
Arst4g03675 643 Gene3D - 67 259 IPR027417 -
Arst4g03675 643 FunFam Translation factor GUF1, mitochondrial 527 601 - -
Arst4g03675 643 Pfam Elongation factor Tu GTP binding domain 69 256 IPR000795 GO:0003924|GO:0005525
Arst4g03675 643 PANTHER TRANSLATION FACTOR GUF1-RELATED 261 642 IPR006297 GO:0005525
Arst4g03675 643 SUPERFAMILY Translation proteins 240 327 IPR009000 -
Arst4g03675 643 CDD lepA_C 448 527 IPR035654 -
Arst4g03675 643 Gene3D - 527 601 IPR038363 -
Arst4g03675 643 Pfam GTP-binding protein LepA C-terminus 535 641 IPR013842 -
Arst4g03675 643 Pfam Elongation factor G C-terminus 448 533 IPR000640 -
Arst4g03675 643 CDD EF4_III 338 413 - -
Arst4g03675 643 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Arst4g03675 643 PRINTS GTP-binding elongation factor signature 114 122 IPR000795 GO:0003924|GO:0005525
Arst4g03675 643 PRINTS GTP-binding elongation factor signature 71 84 IPR000795 GO:0003924|GO:0005525
Arst4g03675 643 PRINTS GTP-binding elongation factor signature 149 159 IPR000795 GO:0003924|GO:0005525
Arst4g03675 643 Gene3D Elongation Factor G (Translational Gtpase), domain 3 331 412 - -
Arst4g03675 643 NCBIfam small GTP-binding protein domain 72 247 IPR005225 GO:0005525
Arst4g03675 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 252 IPR027417 -
Arst4g03675 643 SUPERFAMILY EF-G C-terminal domain-like 339 416 IPR035647 -
Arst4g03675 643 Hamap Elongation factor 4 [lepA]. 65 643 IPR006297 GO:0005525
Arst4g03675 643 FunFam Translation factor GUF1, mitochondrial 331 412 - -
Arst4g03675 643 Gene3D - 413 526 - -
Arst4g03675 643 Gene3D Translation factors 260 330 - -
Arst4g03675 643 FunFam Elongation factor 4 66 260 - -
Arst4g03675 643 FunFam Translation factor GUF1, mitochondrial 413 525 - -
Arst4g03675 643 CDD LepA 70 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03675 Arst-Chr4 115653971 115658927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03675 69 210 Eukaryotic Initiation Factors Gene Family AT1G56070 40.278 2.79e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03675 K21594 - gmx:100781092 1122.46