Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03628 ATGGGTGAGAAAGATATTGGTAATGAAGATGTGGGGTTGAGTTTGAGTTTGAGTTTGAGTTTGGGAAGAGGATGTTCTTCATCTCCGCCACCTTTGAAGCCACAAAGATCGGTTCCTATGAATAACATCAACGAGAAGAGTTCATGGAATGAGTTGTTTCAGTTATTACCACAAGATAGGAGCACAGATATGAGGCCGTTATTTGGTGGAGGAATCAACATGAATTCGATGCCGTCAACGGCGGAGACTCCGCCGGATTGCAACCAGGACAACCGTGATTCATCGCCAAACAACAGCAGTTTATCAAGTGGCAGTGGCTGCAAGCGAAGCGAGAGAGAAGAGGACAATGGCGCTGCGGTTGCCGGCATCGAATTGGCGTCGTGCTCGCGGGGAAGTGATGACGAGGATGGCGGCGGCGGAGAGGCGGCGAGGAAGAAGCTGAGGCTGACGAAGGAGCAGTCGATGTTATTGGAAGAAACGTTCAAGCAGCATAACACGCTGAACCCGAAACAAAAACAGACATTGGCAAAGGAATTGAATCTGAGAGCCAGACAGGTGGAGGTGTGGTTCCAGAATAGGAGAGCAAGGACCAAGTTGAAGCAAACCGAAGTGGATTGTGAATACTTGAAGAGATATTGTGAGAATCTAAGTGAAGAGAATAGGAGGTTGCAAAAAGAAGTGCAAGAGCTTAGGACATTGAAGCTATCTCCACAGCTCTACATGCATATGAACCCTCCAACAACTCTTACAATGTGCCCTTCTTGCGAGCGTGTCGCCGTCTCATCCGCCTCGTCCTCCGCCTCCACCGCTCACGTGCCGGCACTACAAAGTAATTGCAACAACTCGTTGGGTCCAAACATCCAGCGGCCGGTGCGCGTCAACACTTGGCCATTTGACAGCCCAATTTCGCGGCCGTAG 918 0.5 MGEKDIGNEDVGLSLSLSLSLGRGCSSSPPPLKPQRSVPMNNINEKSSWNELFQLLPQDRSTDMRPLFGGGINMNSMPSTAETPPDCNQDNRDSSPNNSSLSSGSGCKRSEREEDNGAAVAGIELASCSRGSDDEDGGGGEAARKKLRLTKEQSMLLEETFKQHNTLNPKQKQTLAKELNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRYCENLSEENRRLQKEVQELRTLKLSPQLYMHMNPPTTLTMCPSCERVAVSSASSSASTAHVPALQSNCNNSLGPNIQRPVRVNTWPFDSPISRP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03628 305 Coils Coil 206 236 - -
Arst4g03628 305 FunFam Homeobox-leucine zipper protein 18 129 205 - -
Arst4g03628 305 SMART HOX_1 142 204 IPR001356 GO:0003677
Arst4g03628 305 Pfam Homeobox associated leucine zipper 200 233 IPR003106 GO:0006355|GO:0043565
Arst4g03628 305 MobiDBLite consensus disorder prediction 19 115 - -
Arst4g03628 305 Pfam Homeodomain 144 198 IPR001356 GO:0003677
Arst4g03628 305 SMART halz 200 243 IPR003106 GO:0006355|GO:0043565
Arst4g03628 305 ProSitePatterns 'Homeobox' domain signature. 175 198 IPR017970 GO:0000981|GO:0006355
Arst4g03628 305 Gene3D - 138 205 - -
Arst4g03628 305 MobiDBLite consensus disorder prediction 73 106 - -
Arst4g03628 305 SUPERFAMILY Homeodomain-like 133 201 IPR009057 -
Arst4g03628 305 CDD homeodomain 144 201 IPR001356 GO:0003677
Arst4g03628 305 MobiDBLite consensus disorder prediction 37 57 - -
Arst4g03628 305 Pfam HD-ZIP protein N terminus 8 113 IPR006712 GO:0005634
Arst4g03628 305 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 18 276 - -
Arst4g03628 305 ProSiteProfiles 'Homeobox' domain profile. 140 200 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03628 Arst-Chr4 115057297 115060425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03628 6 296 Homeobox Transcription Factor Family AT5G47370 51.656 6.46e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst4g03628 HD-ZIP_N 6.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03628 K09338 - gmx:100819624 296.975