Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03601 ATGTGGAATCCACTGTCATGGGTCATGGAAGCTGCTGCTATCATGGCCATTGCCATGGCTCATGGAGGGGGAGAAGGTTGGGATTATCAAGATTTTACCGGCATTGTTATACTGCTACTTGTAAACTCCACAATCAGTTTCATAGAAGAAAACAATGCTGGTAATGCAGCAGCAGCACTCATGGCAAGATTGGCCCCAAAAGCAAAGGTACTCCGTGATGGAAAATGGAGCGAAGAAGATGCATCTGTGTTGGTTCCTGGAGATATAATCAGCATCAAGCTAGGTGACATCATTCCTGCCGACGCACGTCTCCTTGAAGGAGATCCTTTGAAGATCGATCAGTCTGCTCTTACTGGAGAGTCACTTCCGGTTTCAAAACATCCTGGAGATGGAGTATATTCTGGTTCAACATGCAAGCAAGGAGAAATTGAAGCAGTAGTTATTGCAACTGGAGTTCACACATTCTTTGGAAAGGCGGCGCATCTTGTGGAAAACACCACACATGTTGGACATTTCCAGAAGGTCCACATACAGAAACATATATCATCTCTATCATCTTATGTTAGTCAATGTTTTCTATGCCTTACCCTGAAATTAAATCTTGCCATGATCTTGTTACAGGTTTTGCAATCTATTGGGAACTTCTGCATCTGTTCCATTGCTATTGGGATGCTCATTGAAATCATAGTGATATATGGCCCGCAGCAAAGGAAATACCGAGTTGGTATCGATAACCTCCTTGTGTTACTGATTGGCGGAATTCCTATTGCAATGCCAACTGTCCTTTCAGTTACAATGGCTATTGGTTCACACAAATTGTCTCAGCAGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTATGCAGTGATAAAACAGGCACATTAACACTCAACAAGCTTACAGTGGACAAGAATCTTATTGAGGTCTTTGCTGATGGAGTTAATCAGGACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGACCCAAAGGAGGCACGAGCTGGAATAACTGAAATTCACTTCCTTCCATTCAATCCAACAGATAAAAGAACTGCACTTACATACACTGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAACCTTGCACATAACAAGTCAGAAATTGCACAGAGGGTACATGCAATTATAGACAAATTTGCCGAACGTGGCCTTCGCTCACTGGCTGTTGCCCACCAGGAAGTACCTGAGGGAACCAAAGAAAGTTTAGGGGGTCCGTGGGAATTTGTCGGCCTACTCCCTCTATTTGATCCTCCCCGCCACGATAGCGCTGAAACAATCAGAAGAGCTCTTAATCTTGGTGTGAGTGTCAAAATGATCACTGGTGATCAGCTTGCAATTGCTAAGGAAACAGGAAGGCGTCTTGGAATGGGTTCTAACATGTATCCTTCTTCGTCGCTGCTAGGAGAAAGCAAAGATAATTTTGCTTCTGTTCCCGTCGATGATCTTATAGAGAATGCAGATGGTTTCGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCCGACATAGGTATCGCTGTAGCAGATGCCACAGACGCTGCAAGAAGTGCCTCTGACATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAATATATGCTGTATCTATCACCATCCGTATTGTGGTTGGCTTTATGTTACTCACATGCATTTGGGAATTTAACTTTCCTCCCTTTATGGTTCTTGTCATAGCCATTCTCAACGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCTTCTCCAAGTCCTGATAGTTGGAAGCTGAGTGAGATTTTTGCAACTGGGATTGTCCTAGGAGGTTATCTGGCTCTAATGACAGTGATATTCTTCTGGGCAGCATATAAAACTCACTTTTTTCCTAACCATTTTGATGTGAGACATCTCCACGGAGATCTTCATGGTCCACCTACTCATGAAGAGAGTAAAATGCTAGGAGCTGCTATATATCTTCAAGTCAGTATAATTAGTCAAGCCTTAATTTTTGTGACTCGCTCAAGGGGATGGTCCTATACAGAAAGACCCGGTGTTTTGCTTATGATCGCTTTTGTTATAGCTCAACTGATTGCAACTATTGTATCTGCCCTTCTCTCTTGGGAGCTAGCAGGAATCAAAGCCATAGGGTGGGGTTGGACGGGAATCATCTGGGTCTACTCTATTATAACTTACTTGTTTTTGGATCCTATAAAGTTTGCTGTTCGTTATGCATTAAGCGGAAGAGCTTGGAATTTGGTGGTAGACAAACATACTGCATTTATCAACAAAAATGACTTTGGTAGAGAAGCTCGTGAAGCTCAATGGGCTGCTGAGCAGAGAACCTTACATGGTCTCCAGTCTGCTGACATGAAAGTTGAGAAGCACACTTTCAGGGAAATAAATACACTAGCTGACGAGGCCAAGAGGCGTGCAGAAATAGCAAGGATGAGAGAGCTTCACACTCTGAAAGGAAGGGTGGAAACAATGGGCAAGCTAAAGGGTTTAGATGTGGATGCAATCAACAGTCATTACACAGTATAA 2772 0.4307 MWNPLSWVMEAAAIMAIAMAHGGGEGWDYQDFTGIVILLLVNSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVHIQKHISSLSSYVSQCFLCLTLKLNLAMILLQVLQSIGNFCICSIAIGMLIEIIVIYGPQQRKYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFADGVNQDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGITEIHFLPFNPTDKRTALTYTDAAGKMHRVSKGAPEQILNLAHNKSEIAQRVHAIIDKFAERGLRSLAVAHQEVPEGTKESLGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGESKDNFASVPVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVGFMLLTCIWEFNFPPFMVLVIAILNDGTIMTISKDRVKPSPSPDSWKLSEIFATGIVLGGYLALMTVIFFWAAYKTHFFPNHFDVRHLHGDLHGPPTHEESKMLGAAIYLQVSIISQALIFVTRSRGWSYTERPGVLLMIAFVIAQLIATIVSALLSWELAGIKAIGWGWTGIIWVYSIITYLFLDPIKFAVRYALSGRAWNLVVDKHTAFINKNDFGREAREAQWAAEQRTLHGLQSADMKVEKHTFREINTLADEAKRRAEIARMRELHTLKGRVETMGKLKGLDVDAINSHYTV 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03601 923 Pfam haloacid dehalogenase-like hydrolase 292 568 - -
Arst4g03601 923 FunFam Plasma membrane ATPase 448 602 - -
Arst4g03601 923 Gene3D - 872 923 - -
Arst4g03601 923 SFLD C1.7: P-type atpase like 278 605 - -
Arst4g03601 923 SFLD C1.7: P-type atpase like 278 605 - -
Arst4g03601 923 NCBIfam HAD-IC family P-type ATPase 35 159 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 NCBIfam HAD-IC family P-type ATPase 529 634 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 NCBIfam HAD-IC family P-type ATPase 219 503 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 FunFam Plasma membrane ATPase 66 150 - -
Arst4g03601 923 NCBIfam plasma-membrane proton-efflux P-type ATPase 206 780 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst4g03601 923 NCBIfam plasma-membrane proton-efflux P-type ATPase 206 780 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst4g03601 923 FunFam Plasma membrane ATPase 308 455 - -
Arst4g03601 923 Gene3D - 293 591 IPR023214 -
Arst4g03601 923 FunFam ATPase 4 plasma membrane-type 538 790 - -
Arst4g03601 923 Gene3D - 66 150 - -
Arst4g03601 923 PRINTS P-type cation-transporting ATPase superfamily signature 450 461 - -
Arst4g03601 923 PRINTS P-type cation-transporting ATPase superfamily signature 296 310 - -
Arst4g03601 923 PRINTS P-type cation-transporting ATPase superfamily signature 472 482 - -
Arst4g03601 923 PRINTS P-type cation-transporting ATPase superfamily signature 577 589 - -
Arst4g03601 923 PRINTS P-type cation-transporting ATPase superfamily signature 554 573 - -
Arst4g03601 923 PRINTS P-type cation-transporting ATPase superfamily signature 113 127 - -
Arst4g03601 923 ProSitePatterns E1-E2 ATPases phosphorylation site. 298 304 IPR018303 -
Arst4g03601 923 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 822 IPR023298 -
Arst4g03601 923 Gene3D - 28 790 - -
Arst4g03601 923 SFLD p-type atpase 278 605 IPR044492 -
Arst4g03601 923 SFLD p-type atpase 278 605 IPR044492 -
Arst4g03601 923 Pfam E1-E2 ATPase 64 275 - -
Arst4g03601 923 SUPERFAMILY Calcium ATPase, transduction domain A 66 163 IPR008250 -
Arst4g03601 923 PRINTS H+-transporting ATPase (proton pump) signature 412 430 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 PRINTS H+-transporting ATPase (proton pump) signature 554 570 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 PRINTS H+-transporting ATPase (proton pump) signature 526 542 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 PRINTS H+-transporting ATPase (proton pump) signature 735 756 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 PRINTS H+-transporting ATPase (proton pump) signature 585 610 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst4g03601 923 CDD P-type_ATPase_H 1 816 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst4g03601 923 SUPERFAMILY HAD-like 292 601 IPR036412 -
Arst4g03601 923 Gene3D - 308 455 IPR023299 GO:0000166
Arst4g03601 923 PANTHER CALCIUM-TRANSPORTING ATPASE 1 858 - -
Arst4g03601 923 PANTHER CALCIUM-TRANSPORTING ATPASE 1 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03601 Arst-Chr4 114770028 114776624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03601 1 923 Primary Pumps ATPases AT5G62670 76.782 0.0 1416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03601 K01535 - gmx:100794938 1486.09