Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03597 ATGAATGCAAACAAGCCATCAAGGGAAGAATCCATATTCTTAGCAAAGGCAGCACAAGCTGCAGAGAGATACAAGGAAATGGTGGACTTCATGAAGACTCTAGTCCTTTCGATCACCCCGGCTGCCGAGCTTACGGAGGAAGAAAGAAATCTTGTATCGTCAGCTTACAAGAACATGATCGGTCCTCTTCGCACGGGGTGGTGCATTGTTTCGGCAATCGAGAAGAAGGAAAATGACGGCGAAGACGAGAAGCGCGCCGCCATAGTCAGGGCATATAAGTTAGACCTGGAGTCCAATATGTCACATGTGTGCAATGATATTCTTGGACTCCTAGAGTCCAACTTGCTGCCCTCGGCTGCGGCCAGCGACTCTAGGGTTTTTTATTTGAAGATGAAAGGTGATTATATTAGATACTTGTTGAAGTTTGCGGTTGGCGATGATAGAAAGATATCTGCTGATGCGGCCATGGAGGCTTATACGGCGGCTCAGGATATTGCTGTAGTGGATCTTGCGCCTTCTAGTCCAATAAGATTAGGTCTCATTCTCAACTTCTCAGTGTTCTGCCATGAAATCCTCAATGAGCCTGATAAAGCTTGTGACATGGCTAAACAGGGTATTGAAGAAGCAATTGCAGAAATAAAAACACTAGCAGAGCCGCCAAACAAAGACACCACTCTTATAATTCAACTCCTAAGAGATAATCTCTCCAGTTGGACCACTGAGGTCTCTTTGTATGTGTTGTCCGGAAAGAGGAGGACTCTGATTATTTGTTTGTCAGAACCAAAAGTAAAGATTTTGGTAGATAGAGATCCCATAAAAACTTCTTTTGAGAAATGGGCAAAATCCAGTCATTTCTCAAGAACAATAGTTAAGGGACCCGATACTACTACTTGGATTTGGAACCTACATGCTGATGCTCATGATTTCGATAGCTACACTAGTGATTTAGAGGAGATTTTCTGA 963 0.4361 MNANKPSREESIFLAKAAQAAERYKEMVDFMKTLVLSITPAAELTEEERNLVSSAYKNMIGPLRTGWCIVSAIEKKENDGEDEKRAAIVRAYKLDLESNMSHVCNDILGLLESNLLPSAAASDSRVFYLKMKGDYIRYLLKFAVGDDRKISADAAMEAYTAAQDIAVVDLAPSSPIRLGLILNFSVFCHEILNEPDKACDMAKQGIEEAIAEIKTLAEPPNKDTTLIIQLLRDNLSSWTTEVSLYVLSGKRRTLIICLSEPKVKILVDRDPIKTSFEKWAKSSHFSRTIVKGPDTTTWIWNLHADAHDFDSYTSDLEEIF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03597 320 SMART 1433_4 8 252 IPR023410 -
Arst4g03597 320 Gene3D Photosystem I PsaA/PsaB 247 320 IPR036408 -
Arst4g03597 320 SUPERFAMILY Photosystem I subunits PsaA/PsaB 266 318 IPR036408 -
Arst4g03597 320 Gene3D - 1 245 IPR036815 -
Arst4g03597 320 PANTHER 14-3-3 PROTEIN 8 241 IPR000308 -
Arst4g03597 320 Pfam 14-3-3 protein 14 239 IPR023410 -
Arst4g03597 320 Pfam Photosystem I psaA/psaB protein 285 319 IPR001280 GO:0009579|GO:0015979|GO:0016020
Arst4g03597 320 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Arst4g03597 320 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Arst4g03597 320 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Arst4g03597 320 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Arst4g03597 320 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Arst4g03597 320 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Arst4g03597 320 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03597 Arst-Chr4 114724367 114728023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03597 3 244 14-3-3 family AT5G65430 58.264 6.48e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03597 K06630 - tcc:18591785 290.812