Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03589 ATGGCTTCCATCACCATTATGGATTCATCAGAATCTGCATACTTAGAATACATTCAACAATACCTTCTTGAGAATGATTCAATCATTTTTACTAATGATCTCAAAATGGATGATTCTAAATCATGTCAATCTGGTTCAAACCCTAATTGCGATAGCATTTTTTATACAACTTCTCATAGTGAGAGTAGTCCTACCGGTGCCTCGGCAGAGCGTGAAGTGCACGCGCCTCCAACATGGAAGCGTTATAGGGGTGTGAGGCGTAGGCCGTGGGGGAAGTTTGCCGCTGAGATTAGGGATCCAAAAAAGAATGGGGCTAGGGTTTGGCTTGGAACTTATGAGACTGAAGAAAAAGCGGCTATAGCATATGATAAAGCAGCTTTCAAAATGCGCGGTCGAAAGGCTAAGTTGAATTTTCCTCATCTCATTGGCTCAGACGAGAAATCTGTCTTATCGTCTGAGCCAATGAGAGCATCCGCTGTAAAACGGATCTCTCCAGAACCTTCTTTGCCATCCTCGCCTTCATCGGAGGATGATTCGAACTCGCCGGGGTCAAAGAGAAGGAGGAACCTAGCGGATTTACTGAACAAGTTAGCCAAGAATAGAAACCAAGCTAATAAGGTGGTTAAAACGGATCCAGAGGCAAATGTTGCTGATTATTGGGTGAATGATGAATTCAATATGATTCTAGTTTAA 693 0.43 MASITIMDSSESAYLEYIQQYLLENDSIIFTNDLKMDDSKSCQSGSNPNCDSIFYTTSHSESSPTGASAEREVHAPPTWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEKAAIAYDKAAFKMRGRKAKLNFPHLIGSDEKSVLSSEPMRASAVKRISPEPSLPSSPSSEDDSNSPGSKRRRNLADLLNKLAKNRNQANKVVKTDPEANVADYWVNDEFNMILV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03589 230 SMART rav1_2 81 145 IPR001471 GO:0003700|GO:0006355
Arst4g03589 230 Gene3D AP2/ERF domain 80 140 IPR036955 GO:0003700|GO:0006355
Arst4g03589 230 MobiDBLite consensus disorder prediction 147 186 - -
Arst4g03589 230 PANTHER DNA-BINDING DOMAIN 47 202 IPR044808 GO:0003700|GO:0009873
Arst4g03589 230 ProSiteProfiles AP2/ERF domain profile. 81 139 IPR001471 GO:0003700|GO:0006355
Arst4g03589 230 FunFam Ethylene-responsive transcription factor 2 80 140 - -
Arst4g03589 230 MobiDBLite consensus disorder prediction 165 179 - -
Arst4g03589 230 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Arst4g03589 230 Coils Coil 187 207 - -
Arst4g03589 230 SUPERFAMILY DNA-binding domain 81 140 IPR016177 GO:0003677
Arst4g03589 230 PRINTS Ethylene responsive element binding protein signature 121 141 IPR001471 GO:0003700|GO:0006355
Arst4g03589 230 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Arst4g03589 230 CDD AP2 80 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03589 Arst-Chr4 114678522 114679408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03589 34 176 AP2-EREBP Transcription Factor Family AT2G44840 52.597 3.12e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst4g03589 AP2 2.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03589 K09286 - gmx:548037 197.593