Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03575 ATGGAATCCAAATTGGGACCACGAAATCCTATTCTCTGTGCTCAATACCGTCAATTATTTCACCAAGGTACCAACCTCTGTCTAGCTGTAGGATGTGACTGTCCTCCTCCTTCTCCACTTTCTCACTTTTCATTGTCACCACCACCGTTACCTCCTCCGCCATTGTTGCCGCCACCGCCACCGCCACCCCCACTAGTTATTTCCCCACCAAAGCCGCCACTGCCACCGCCACCGCCACCACCACCACCACTAGCTCTTTCCTCACCAATGCCACCACCGCCACGACTTTTCTCTCCTGCCCCTCCACCTCCTCAAACTCCCCTGCCGATGAAACCTTCCTCTAAACCAACCCAGGTACTGCATTTCCCTCCTCCAAGTTCGACTCCAGCACCATCTTTTTCGTCAAGTGGCGTCATCGTTGGAATGGCGGCAATCGTTACTTTCGCCATTTTGATTGTGGTGCTTAGCGCTTTTGGTATTTCTTATTGGAAGAATTGGAAGAGAAAACATGATAAAGATCTTGGATTTAAAGGCAATAACGGAATAATAGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGCAGTTGCAACAGATGGATTCTCCAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCATGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCCGGCCACCTTCGACTTCTTGTCTACGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGAAAGGTCCTACTATAGATTGGCCTACAAGAATGAGGATTGCTCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATTCTCCTCGATTTTAATTTCCAAGCAAAGGTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCGGATATGAATACGCATGTTTCCACTCGAGTCATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAACCTCACTGAAAAAGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTCGAGTTAATTACTGGCCGCCGACCAGTAATTGATTCACGTCATACTTTCATGGAGTGGTTTCATGAATTCTCGCAGGCAATGCCTTTGCTAATAAAGGTTTTGAAAGAGAATAATTTTGAAGTTGTAGCTGACCAAAAGCTCCAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGTTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTACGCTTAGATTCTGAGGCTGCTACATACAGACGAGAAATGATCAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA 1557 0.4522 MESKLGPRNPILCAQYRQLFHQGTNLCLAVGCDCPPPSPLSHFSLSPPPLPPPPLLPPPPPPPPLVISPPKPPLPPPPPPPPPLALSSPMPPPPRLFSPAPPPPQTPLPMKPSSKPTQVLHFPPPSSTPAPSFSSSGVIVGMAAIVTFAILIVVLSAFGISYWKNWKRKHDKDLGFKGNNGIIEMSSKNRIFRYEELAVATDGFSKANLVGEGGFGYVHKGVLPNGMEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHLRLLVYEFVPNNTLEFHLHGKGPTIDWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPVIDSRHTFMEWFHEFSQAMPLLIKVLKENNFEVVADQKLQNQYEATEMVSMLASAAASIRYEAKFRPKMSQIVRALEGDASQVAEFTSNVLRLDSEAATYRREMIKIISDMSGSTS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03575 518 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Arst4g03575 518 ProSiteProfiles Protein kinase domain profile. 204 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03575 518 SMART serkin_6 204 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03575 518 FunFam proline-rich receptor-like protein kinase PERK8 280 492 - -
Arst4g03575 518 SUPERFAMILY Protein kinase-like (PK-like) 181 478 IPR011009 -
Arst4g03575 518 ProSitePatterns Protein kinases ATP-binding region signature. 210 232 IPR017441 GO:0005524
Arst4g03575 518 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 179 279 - -
Arst4g03575 518 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 150 498 IPR047117 -
Arst4g03575 518 MobiDBLite consensus disorder prediction 41 128 - -
Arst4g03575 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Arst4g03575 518 Gene3D Transferase(Phosphotransferase) domain 1 280 498 - -
Arst4g03575 518 Gene3D Phosphorylase Kinase; domain 1 168 279 - -
Arst4g03575 518 MobiDBLite consensus disorder prediction 41 111 - -
Arst4g03575 518 Pfam Protein tyrosine and serine/threonine kinase 208 478 IPR001245 GO:0004672|GO:0006468
Arst4g03575 518 PRINTS Proline rich extensin signature 52 73 - -
Arst4g03575 518 PRINTS Proline rich extensin signature 37 49 - -
Arst4g03575 518 PRINTS Proline rich extensin signature 91 108 - -
Arst4g03575 518 PRINTS Proline rich extensin signature 73 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03575 Arst-Chr4 114425731 114505763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03575 177 498 Trihelix Transcription Factor Family AT4G32710 58.258 8.66e-124 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Arst4g03575 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03575 - - ahf:112743291 735.332