Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03574 ATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGAAGTTGCAACAGATGGGTTCTCGAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCATGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCCGGCCACCGTAGACTTCTCGTCTACGAATTTGTTCCAAACAATACATTAGAGTTTCATCTACATGGGCAAGGTCCTACTTTAGATTGGCCTACAAGAATGAGGATTGCCCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATTCATCGTGATATCAAAGCTGCTAACATTCTCCCCGATTTTAATTTTCAAGCAAAGCTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCGGATATGAATACGCATGTTTCGACTCGAGTCATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAATCTCACTGAAAAAGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTCGAGTTAATTACTGGCCGCCGACCAGTAATTGATTCACATCATACTTTCATGGAGGCAATGCCTTTGCTAACAAAGATTTTGAAAGAGAATAATTTTAAAGTTGTAGCTGACCAAAAGCTACAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCCTCTCAAGTAGCTGAGTTCACTTCTAATGTATTGTGCTTGGATTCTGAGGCTGCTATATACAGACGAGAAATGATCAAAATCATTAATGACATGAGTGGATCCACGAGTTAA 984 0.4258 MSSKNRIFRYEELEVATDGFSKANLVGEGGFGYVHKGVLPNGMEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHRRLLVYEFVPNNTLEFHLHGQGPTLDWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILPDFNFQAKLADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPVIDSHHTFMEAMPLLTKILKENNFKVVADQKLQNQYEATEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSEAAIYRREMIKIINDMSGSTS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03574 327 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03574 327 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Arst4g03574 327 SMART serkin_6 20 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03574 327 ProSitePatterns Protein kinases ATP-binding region signature. 26 48 IPR017441 GO:0005524
Arst4g03574 327 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 301 IPR047117 -
Arst4g03574 327 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
Arst4g03574 327 CDD STKc_IRAK 26 289 - -
Arst4g03574 327 ProSiteProfiles Protein kinase domain profile. 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03574 327 Gene3D Transferase(Phosphotransferase) domain 1 96 305 - -
Arst4g03574 327 FunFam Receptor-like serine/threonine-protein kinase At4g25390 1 95 - -
Arst4g03574 327 FunFam proline-rich receptor-like protein kinase PERK8 96 301 - -
Arst4g03574 327 PIRSF ILK 2 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03574 Arst-Chr4 114399228 114401876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03574 1 307 Trihelix Transcription Factor Family AT4G32710 60.063 2.18e-123 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Arst4g03574 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03574 - - ahf:112743291 624.78