Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03557 ATGTCGGAAAAAATTATTGTCTTAATATGGCTTTGTGTGTTTATAGTAAAAGTTTCTTCATCAAGTGAAGCAAATGCACTCTTCAAATGGAAGGCCAGCCTTGAGAACCAAAGCCAAGTTATGTTATCATCTTGGAAGAACGGGACAAGTCCATGCATATGGAAAGGAATTCAATGTGACAAATCAAAATCCATCGCAACCATCAATCTTGAAAACTTTGGACTCAAAGGTACACTTCACAGTCTTAGCTTCTCTTCATTTCCCAACCTCATTTCCATAAACATATACAACAACTCGTTCCATGGAACCATTCCCTCACACATTGGTAACATGTCAAAAGTCAACACTTTGAACTTTTCTTTAAATCATTTTGAGGGTTCCATCCCTAAAGAATTATGGACACTGAGGAGTTTACAAAAGCTTGATCTTTCATTGTGTTATCATCTAAGTGGACCTGTCCCTTCTTCCATTGAAAACTTGGCCAACTTGACATATCTAGACTTAGGAGAAAACAATCTTTCTAGCCACATTCCTCCTGAGATTGGGAAACTAAGAAACCTTTTGTTTCTTGGTATTGCTGAGAATAATCTTGATGGTTCCATTCCCCATGAAATTGGCATGTTAACAAATCTTGAGTATCTTGATTTGTCAGGAAATGTTCTCTCTGGTAATATCCCTTCTACAATTAGTAACATGACCAATTTGCATGAAGTTTCAATTTCTAATAACACCCTCAATGGCTCAATCCCTTCCTCCATTGGGAGCATGTCTAACTTGACATTGCTATGGCTTGATGGCAATCAACTTTCTGGATCCATCCCTGCATCCATAGGAAACTTGTCTAGTCTCTATTCGCTTCAACTCGATTCGAATAGCCTCACCGGATCCATTCCTTCCACAATTGGAAACATGACAAGTCTTGTTGAGATTTTTCTCCGCTTTAACAATCTTTCAGGACACATTCCTGCCTCTGTTGGCAATTTGATCAGCTTGGAATCCTTATATCTCCAAGGAAACAATCTCTCTGGATCTATTCCTGACTCAATTGGAAACTTGAAAAGCCTCTCCATTCTTGAACTGTCCTTTAACAAACTCACTGGAACCATTCCACACTCAATTAATAACATTACCAACATGATTGACTTTCTAGTAGCCTCAAATAATCTCACTGGTCAATTGCCACCTCACATTTGCTTAGGTGGTTCATTGAAGTTCTTCAATGTTGATCACAACCATTTCACTGGTCCAGTACCAAGTACCTTCAAGAACTGCTCTAGTCTTGTTAGAATAAGGTTAGAGCAGAACCATTTGAAGGGAGACATATCACAAGATTTTGGCATTTATCCTAATTTGGTGCATATTGACCTGAGTGACAACAAATTTTATGGTCAAATTTCACCAAACTGGGGGAAGAGCCATAATCTTCAGAACTTGTTGATGTCCAATAATAATATTTCTGGTGCTATACCAATACAAATTGTTGAGGCTACCAATCTAGGAAGGCTTCATCTTTCTTCTAATCATTTGAGTGGAAAGATTCCAAATGAAATAAGAAATATGAGAAGCCTGTTTGAACTCAAGATCAGCAACAATCATCTTTCAGGAAACATTCCATCAGATATAGGATCATTGCATGGTCTTCAAATCTTAGACCTAGCAGGAAATGAATTGAGTGGCAACATACCAAGACAAGTTGTGCAGTTACCCAACTTGTTGGAATTGAATTTGAGCAACAACAAACTAGAGGGAAGTATCCCGTCTGATTTTCAATCACTGCAAACTCTTTACTCTCTTGATCTTAGCTGCAATTTGTTGAATGGACCGATACCAAAAGTTCTTGGAGAGTTGAAGGAATTGCGATCATTGAACCTTTCACACAACAATCTTTCTGGGACAGTTCCATCAAGCTTTGATGCCATGTCAAGCTTGATTTCTGTCAACATATCATACAATCAACTAGAAGGCCCTCTTCCAAACAATAAAGCCTTTCTTAGTTCTTCAATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTCTCTGGCTTGGTGCCATGTCCAAGCAATCTTATCAGCAAAAATCACAAGGTCATGTTATTGGTATTACTTCTTGTCTTTGGAGTACTAGTACTTGTGCTTTCTGTGGTGGCTATTTCTGTATATATTCTTTGTAGAAAAGCAAGAAAGAAAACAGGCACAAATCAAGAAACACAGCCAAAAGAACTTTTTTCCATATGGAGCCATGATGGGAAAATGGCATTTGAAACTATCATTGAAGCCACCAACAATTTTGATGACAAATATATCATTGGAATTGGAGGGCAAGGATCTGTTTACAGGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATACAGAAACATCCAACTTGAAATCATTTGAAAATGAGATCCAATCATTGACAGAAATCAGGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCACTCGCGGTTCTCATTTCTGGTTTATAAGTTCTTGGAAGGTGGAAGCTTGGATCAAGTACTAAGAGATGAAACACATGCAACTCTGTTTGATTGGAAAAAGAGGGTGAATGTGGTTAAAGGAGTCGCAAATGCTTTGTCATACATGCATCATGATTCCATACCCCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAGATTCAGACTATGAAGCTCATGTATCTGATTTTGGAACAGCCAAGTTCTTGAAACCTGGGTCAAGTTGGACAACACTTGCAGTAACCTTTGGCTATGCAGCTCCAGAACTAGCTCAGACAATGGAAGTGACAGAGAAATGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATTCTTATGGGAAAGCATCCTGGGGATCTGATAAGTTCATTGTTGTCACCATCAACAGCATTAATCAGTTGCAATTTGTTATTGGTTGAAGTCATAGATCAGAGACCTCCACATCCTGAAGAATTAATGGTTGGTGATATCATGAAGATCATAAAGTTGGCACTGAATTGCTTGAGCCACAATCCACAATCTCGACCAAGTATGCATCAAGTGTCCAAAGAGCTTATGATGGGAAAATTGCCTTTTGCTAATCACCAGTTTCCTATCATCAGAATTGGACAGCTCAATGAAGAATGGCAAACTCCACTTATATGA 3180 0.3852 MSEKIIVLIWLCVFIVKVSSSSEANALFKWKASLENQSQVMLSSWKNGTSPCIWKGIQCDKSKSIATINLENFGLKGTLHSLSFSSFPNLISINIYNNSFHGTIPSHIGNMSKVNTLNFSLNHFEGSIPKELWTLRSLQKLDLSLCYHLSGPVPSSIENLANLTYLDLGENNLSSHIPPEIGKLRNLLFLGIAENNLDGSIPHEIGMLTNLEYLDLSGNVLSGNIPSTISNMTNLHEVSISNNTLNGSIPSSIGSMSNLTLLWLDGNQLSGSIPASIGNLSSLYSLQLDSNSLTGSIPSTIGNMTSLVEIFLRFNNLSGHIPASVGNLISLESLYLQGNNLSGSIPDSIGNLKSLSILELSFNKLTGTIPHSINNITNMIDFLVASNNLTGQLPPHICLGGSLKFFNVDHNHFTGPVPSTFKNCSSLVRIRLEQNHLKGDISQDFGIYPNLVHIDLSDNKFYGQISPNWGKSHNLQNLLMSNNNISGAIPIQIVEATNLGRLHLSSNHLSGKIPNEIRNMRSLFELKISNNHLSGNIPSDIGSLHGLQILDLAGNELSGNIPRQVVQLPNLLELNLSNNKLEGSIPSDFQSLQTLYSLDLSCNLLNGPIPKVLGELKELRSLNLSHNNLSGTVPSSFDAMSSLISVNISYNQLEGPLPNNKAFLSSSIESLKNNKGLCGNVSGLVPCPSNLISKNHKVMLLVLLLVFGVLVLVLSVVAISVYILCRKARKKTGTNQETQPKELFSIWSHDGKMAFETIIEATNNFDDKYIIGIGGQGSVYRAELPSGMVVAVKKLHTETSNLKSFENEIQSLTEIRHRNIIKLYGFCQHSRFSFLVYKFLEGGSLDQVLRDETHATLFDWKKRVNVVKGVANALSYMHHDSIPPIVHRDISSKNVLLDSDYEAHVSDFGTAKFLKPGSSWTTLAVTFGYAAPELAQTMEVTEKCDVYSFGVLCLEILMGKHPGDLISSLLSPSTALISCNLLLVEVIDQRPPHPEELMVGDIMKIIKLALNCLSHNPQSRPSMHQVSKELMMGKLPFANHQFPIIRIGQLNEEWQTPLI 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03557 1059 Pfam Protein kinase domain 767 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03557 1059 SMART LRR_typ_2 160 184 IPR003591 -
Arst4g03557 1059 SMART LRR_typ_2 568 591 IPR003591 -
Arst4g03557 1059 SMART LRR_typ_2 256 279 IPR003591 -
Arst4g03557 1059 SMART LRR_typ_2 208 232 IPR003591 -
Arst4g03557 1059 SMART LRR_typ_2 328 352 IPR003591 -
Arst4g03557 1059 SMART LRR_typ_2 520 544 IPR003591 -
Arst4g03557 1059 SMART LRR_typ_2 616 639 IPR003591 -
Arst4g03557 1059 SMART LRR_typ_2 280 304 IPR003591 -
Arst4g03557 1059 Coils Coil 795 815 - -
Arst4g03557 1059 FunFam Leucine-rich repeat receptor protein kinase EMS1 178 272 - -
Arst4g03557 1059 Pfam Leucine Rich Repeat 210 231 IPR001611 GO:0005515
Arst4g03557 1059 Pfam Leucine Rich Repeat 570 592 IPR001611 GO:0005515
Arst4g03557 1059 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Arst4g03557 1059 SUPERFAMILY RNI-like 68 375 - -
Arst4g03557 1059 FunFam MDIS1-interacting receptor like kinase 2 840 1036 - -
Arst4g03557 1059 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Arst4g03557 1059 Pfam Leucine rich repeat 594 653 IPR001611 GO:0005515
Arst4g03557 1059 SUPERFAMILY RNI-like 345 660 - -
Arst4g03557 1059 Gene3D Transferase(Phosphotransferase) domain 1 840 1037 - -
Arst4g03557 1059 ProSiteProfiles Leucine-rich repeat profile. 570 593 IPR001611 GO:0005515
Arst4g03557 1059 SMART LRR_sd22_2 256 282 - -
Arst4g03557 1059 SMART LRR_sd22_2 544 570 - -
Arst4g03557 1059 SMART LRR_sd22_2 304 330 - -
Arst4g03557 1059 SMART LRR_sd22_2 616 639 - -
Arst4g03557 1059 SMART LRR_sd22_2 352 378 - -
Arst4g03557 1059 SMART LRR_sd22_2 208 234 - -
Arst4g03557 1059 SMART LRR_sd22_2 160 189 - -
Arst4g03557 1059 SUPERFAMILY Protein kinase-like (PK-like) 748 1030 IPR011009 -
Arst4g03557 1059 ProSiteProfiles Protein kinase domain profile. 765 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03557 1059 FunFam Leucine-rich repeat receptor protein kinase MSP1 728 839 - -
Arst4g03557 1059 PANTHER LEUCINE RICH REPEAT KINASE 2 326 1034 - -
Arst4g03557 1059 PANTHER LEUCINE RICH REPEAT KINASE 2 326 1034 - -
Arst4g03557 1059 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 283 372 - -
Arst4g03557 1059 Gene3D Phosphorylase Kinase; domain 1 725 839 - -
Arst4g03557 1059 Gene3D Ribonuclease Inhibitor 385 695 IPR032675 -
Arst4g03557 1059 ProSitePatterns Tyrosine protein kinases specific active-site signature. 885 897 IPR008266 GO:0004672|GO:0006468
Arst4g03557 1059 Gene3D Ribonuclease Inhibitor 20 175 IPR032675 -
Arst4g03557 1059 Gene3D Ribonuclease Inhibitor 176 272 IPR032675 -
Arst4g03557 1059 Gene3D Ribonuclease Inhibitor 273 380 IPR032675 -
Arst4g03557 1059 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 376 691 - -
Arst4g03557 1059 FunFam Nuclear pore complex protein NUP107 20 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03557 Arst-Chr4 114174700 114177961 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03557 5 932 Receptor kinase-like Gene Family AT4G08850 45.032 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst4g03557 Pkinase 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03557 - - ahf:112797681 1739.16