Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03555 ATGCCACCCATGTCCCAACAACTTGTCTTCATATTCCTTTGTGTCCTTATTGTAAAACTCTCTTGGGTTGCAAGTGAAAAGAGTGAAGCAAATGCCCTCTTAAAGTGGAAGGCCAGCCTGGAGAACCAAAGCCAAGTTGCCTTATCATCTTGGAAGAACGGGACAAGCCCATGCAGATGGACAGGAATTCAATGTGATAGATCCAATTCCGTAACCGCCATCAATCTTGAAAATTATCTTCTCAAAGGTACACTCCACGCTCTAGACTTTTCCTCACTCCCCAACCTCCTCACCTTTAACATCTACAACAACTTCTTTCATGGAACCATTCCCCCACAAATTGGTAACATGTCCAAAATCAATCGTTTGAACTTCTCTTTGAATCCTTTTGATGGTTCCATCCCTCAAGAGATGTGGACACTGAGAAGCATACGCTGGCTTGATCTTTCCTTCTGTAATTATCTAACAGGACCCATCCCTTCTTCCATTGCAAATTTGACAAACTTATCATATCTAGATTTAGGAGGCAACAATCTCTCCTGCTCCATTCCTCCTACAATTGGCAAACTGAACAACCTTGCCTTTTTTTCTATCGAGTCTAGTAAGATTGGAGGTTCCATTCCCCATGAAATCGGAATGTTGTCAAATCTAGAGTATCTTGATTTCATAGGAAACGATCTCACTGGCAATATCCCTTCTACAATTGCTAATATGAGCAAGTTAAATCAACTTTTACTATCTAACAACACCCTCTCTGGCCCAATCCCACCCTTCCTATGGAACATGTCTAACCTCACCTTGCTGTGGCTTGATTCCAATAACTTTTCTGGAAATATCCCTACCTCAATAGGAAACTTGGTCAATTTGGAGTCCCTTAATATGATGAAAAACCAACTTTCTGGATCCATTCCTTCCACAATTGGAAACATGACAAATCTTGTTGAGATATCTCTCGACTTCAACAATTTTGAAGGACACATTCCTGCCTCTGTTGGTAATTTGATCAACTTGGACACCTTAACTCTCCAAGGAAACTTTCTCTCAGGATCTATTCCTGACACAATTGGAAACTTGAACCGGCTCTCCATGTTAAAATTGTCATCCAACATGCTCAGGGGCAACATTCCGCAAGCCGTTAATAACCTTACCAACATGAATGGCTTTCTTGTAGACAATAATTATCTCATTGGCCACTTGCCGCCTCAAATCTGCTTAGGTGGTTCACTAGCATCCTTCGTTGCTCAAAACAACCGTTTCACTGGTCCAGTACCAAGCAGCTTGAAGAACTGCTCTAGTATTATCTACATAACTTTACAGAATAACCATTTGGAAGGAGACATATCCCAAGACTTTGGTGTTTATCCAAATTTGAATTACATTGATCTAAGTAACAACAAATTTCATGGCCAAATTTCATCAAACTGGGGCAAGTGCAATAGTCTTCAAGTCTTGATCATTGCCAAAAATAATATTTCCGGTGGTATATCGCCACAAATTGCTGAGGCTACCAAGCTGGGCAGGCTTCATCTTTTTTCAAACCAATTGAGCGGAAATATTCCAAAAGAACTGGGGAATATGACAAACTTGTTTGAACTCAGGATCGACAACAATCATCTTTCTGGAAATATTCCACCCGAAATAGGATTGTTGCAAGGTCTCAGTCACTTGAACCTAGCAGGAAATGAGTTGAGTGGCAACATACCGATTCAAGTTGTTCAGTTATCTAACTTGTTGGAATTGAACTTGAGCAACAACAAATTAGAAGGAAGTATCCCCTCTGACTTCAAGTCATTGGAAACTCTCAATTCTCTTGATCTTAGTGGGAATTTGTTGAATGGTACAATACCAAGAGTGCTTGGAGAATTGAAGAACTTGCAGTGGTTGAATCTCTCTCGCAACAATCTTTCTGGCACAATTCCATCTAGTTTTAATGGCATGTCAAGCTTAGCTTTTGTCAACATATCATACAACCAGTTAGATGGGCCTCTTCCAAATAACAGAGCCTTTCTTCATGCTTCAATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTCACTGGCTTGGTGCCATGCCCAAGCAGTCCTAGCGGTAAAAGTCACAAGGTCAAGTCATTGGTTCTGCTTCTTATCTTTGGAGTATTAGCACTAGCACTTTGTGTGATTGGTGTTTCAGTATATATTCTTTGTAGAAAAGCAAGAAAGAAAGAAGCCCCCGCCAGAGAAATGCAACCAGAAGAACAATTTTCCATATGGAGTCATGATGGAAAAATGGCATTTGAAACCATCATTAAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAAGGCTGAGTTGCCTTCAGGTATGGTTGCTGTGAAAAAACTTCACATGGAATCAGATGCGGAGGATAAGTTGAATTGGAAGGCATTTGAAAATGAGATCAAAGCATTGACAGAAATCAGGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCATTCACGATTCTTCTTTTTGGTATACAAGTACCTGGAGGGTGGCAGTTTGAATCATGTACTAGGTGATGAAAAGCAAGCAACTGCATTTGACTGGGAAAGGCGGGTGAATGTGGTTAAAGGAGTTGCTAATGCTTTGTCATATATGCATCATGGTTGCAAACCCCCTATAGTTCATCGTGACATATCAAGCAAGAATATTCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGTTTCTACAGCCTGGTTCAAATTGGACAACACATGCAGTAGTCACCTACGGCTATGGTGCTCCAGAGCTTGTTCAAACTATGGAAGTGACCGAAAAAAGTGATGTATATAGCTTTGGAGTGCTTTGTTTTGAAATCCTTCTGGGAAAGCATCCGGCAGATCTGATAAATTCATTGTTGTCACCATCAACAGCATCAACAACATACAATTTGCTATTGGTTGACGTCATAGATCAAAGGCCTCCTCATCCTGAGAAGTCAGTTGTTGGGGAAATCATGTTGATCACAAAGTGGGCGCTTGAGTGTTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTGTCTAAAGAACTCATGATGGGAAAATCACCTTTCTCTCATGACCACTTTCCCATGATCAGACTTGGACAACTCAATCAAGAATTATTGGAAACTCCACTTATGTGA 3216 0.4052 MPPMSQQLVFIFLCVLIVKLSWVASEKSEANALLKWKASLENQSQVALSSWKNGTSPCRWTGIQCDRSNSVTAINLENYLLKGTLHALDFSSLPNLLTFNIYNNFFHGTIPPQIGNMSKINRLNFSLNPFDGSIPQEMWTLRSIRWLDLSFCNYLTGPIPSSIANLTNLSYLDLGGNNLSCSIPPTIGKLNNLAFFSIESSKIGGSIPHEIGMLSNLEYLDFIGNDLTGNIPSTIANMSKLNQLLLSNNTLSGPIPPFLWNMSNLTLLWLDSNNFSGNIPTSIGNLVNLESLNMMKNQLSGSIPSTIGNMTNLVEISLDFNNFEGHIPASVGNLINLDTLTLQGNFLSGSIPDTIGNLNRLSMLKLSSNMLRGNIPQAVNNLTNMNGFLVDNNYLIGHLPPQICLGGSLASFVAQNNRFTGPVPSSLKNCSSIIYITLQNNHLEGDISQDFGVYPNLNYIDLSNNKFHGQISSNWGKCNSLQVLIIAKNNISGGISPQIAEATKLGRLHLFSNQLSGNIPKELGNMTNLFELRIDNNHLSGNIPPEIGLLQGLSHLNLAGNELSGNIPIQVVQLSNLLELNLSNNKLEGSIPSDFKSLETLNSLDLSGNLLNGTIPRVLGELKNLQWLNLSRNNLSGTIPSSFNGMSSLAFVNISYNQLDGPLPNNRAFLHASIESLKNNKGLCGNVTGLVPCPSSPSGKSHKVKSLVLLLIFGVLALALCVIGVSVYILCRKARKKEAPAREMQPEEQFSIWSHDGKMAFETIIKATNNFDDKYLIGIGGQGSVYKAELPSGMVAVKKLHMESDAEDKLNWKAFENEIKALTEIRHRNIIKLYGFCQHSRFFFLVYKYLEGGSLNHVLGDEKQATAFDWERRVNVVKGVANALSYMHHGCKPPIVHRDISSKNILLDSEYEAHVSDFGTAKFLQPGSNWTTHAVVTYGYGAPELVQTMEVTEKSDVYSFGVLCFEILLGKHPADLINSLLSPSTASTTYNLLLVDVIDQRPPHPEKSVVGEIMLITKWALECLSQSPQFRPTMHQVSKELMMGKSPFSHDHFPMIRLGQLNQELLETPLM 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03555 1071 Pfam Protein kinase domain 773 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03555 1071 FunFam Piriformospora indica-insensitive protein 2 282 376 - -
Arst4g03555 1071 SMART LRR_typ_2 238 262 IPR003591 -
Arst4g03555 1071 SMART LRR_typ_2 93 117 IPR003591 -
Arst4g03555 1071 SMART LRR_typ_2 166 190 IPR003591 -
Arst4g03555 1071 SMART LRR_typ_2 622 645 IPR003591 -
Arst4g03555 1071 SMART LRR_typ_2 286 310 IPR003591 -
Arst4g03555 1071 SMART LRR_typ_2 334 358 IPR003591 -
Arst4g03555 1071 SMART LRR_typ_2 526 550 IPR003591 -
Arst4g03555 1071 SMART LRR_typ_2 574 597 IPR003591 -
Arst4g03555 1071 SUPERFAMILY RNI-like 74 398 - -
Arst4g03555 1071 Gene3D Ribonuclease Inhibitor 388 695 IPR032675 -
Arst4g03555 1071 FunFam Nuclear pore complex protein NUP107 26 184 - -
Arst4g03555 1071 FunFam Leucine-rich repeat receptor protein kinase MSP1 733 849 - -
Arst4g03555 1071 ProSiteProfiles Protein kinase domain profile. 771 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03555 1071 Gene3D Transferase(Phosphotransferase) domain 1 850 1051 - -
Arst4g03555 1071 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 383 697 - -
Arst4g03555 1071 Gene3D Phosphorylase Kinase; domain 1 732 849 - -
Arst4g03555 1071 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Arst4g03555 1071 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Arst4g03555 1071 Gene3D Ribonuclease Inhibitor 279 387 IPR032675 -
Arst4g03555 1071 Gene3D Ribonuclease Inhibitor 183 278 IPR032675 -
Arst4g03555 1071 ProSitePatterns Tyrosine protein kinases specific active-site signature. 895 907 IPR008266 GO:0004672|GO:0006468
Arst4g03555 1071 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Arst4g03555 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 442 1042 - -
Arst4g03555 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 442 1042 - -
Arst4g03555 1071 SUPERFAMILY L domain-like 411 685 - -
Arst4g03555 1071 SUPERFAMILY Protein kinase-like (PK-like) 751 1041 IPR011009 -
Arst4g03555 1071 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Arst4g03555 1071 FunFam Leucine-rich receptor-like protein kinase family protein 185 281 - -
Arst4g03555 1071 FunFam MDIS1-interacting receptor like kinase 2 850 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03555 Arst-Chr4 114121257 114124867 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03555 3 943 Receptor kinase-like Gene Family AT4G08850 43.127 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst4g03555 Pkinase 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03555 - - aip:107635237 1404.81