Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03553 ATGAACTTCATAGCATGCAGGTGCAGGGGGATCATCATCCTCTTCATATTCCTGTGTGTCCTAGTAAAACTCTCTTCAACTTACACCATGGAAGCAAATGCACTCTTGAAGTGGAAAGCCAGCCTTGACTACCAAAGCAAACCCACCTTGTCATCTTGGAAGAACGGGACCAGTCCATGCAGATGGAAGGGGATTCATTGTGATAAATCCAGGTCCATCACGACCATGAGTCTTGAAAATTTTGGACTCCAAGGTACACTCCACACTCTCAACTTCTCCTCATTCCCCAGCCTCCTCACCATAAATATCTACAACAATTTCTTTTATGGAACCATACCCCCTCAAATTGGTAATATGTCCAGAGTCAATATATTGAACTTCTCTAAAAATTCTTTTGAGGGTTCCATCCCTAAAGAGATGTGGACTTTGAGGAGTTTACAAATGCTTGATCTTTCACTCTGTTCCAGTCTAAGTGGACCAATCCCAGGTTCCATTGCAAATTTGACCAACTTAACATATCTAGACTTAGGAAGCAACAATTTTTCTGGTAGCATTCCTCATGAGATTGGAAAATTGGTCAACCTTAATTATCTTGCTGTCAGCGGAAACCACTTGTCTGGTTTCATTCCGCAAGAAATTGGAAGACTGACGAACCTTACGCTGCTTGATTTGTCAGAGAACACTCTCAATGGTACTATCCCTTCTGTAATAACTAACCTCAGCTACTTGAATGCACTTCTTCTTGATAATAACACCCTTTCTGGCCTAATCCCACCATCCCTGTGGAACATGTCTAAGTTGAATTATCTTTTTCTTAATGGCAATCGACTTTCTGGATCAATCCCTGCTTCCATCGGAAACTTGGCCAATTTGATAGGCCTTACACTTGATTCCAACCACCTTTCTGGACCCATTCCTTCTACCATTGGGAATATGACATTACTTAGCTACTTATTCCTTGGCTGGAATCATTTCTTTGGACGAATTCCTGCCTCTATTGGTAACCTCATCAATTTGGCTATACTTGAACTTGAAGGAAACAATTTCTCTGGCTCTATTCCTGATACAATTGGAAACCTGAAAAAGCTTACCAGACTAGATTTGTCCTTTAACAAGTTTAGTAGCAAACTTCCACAAACCATGAATAACTTTACCATTTTAGAGGTCTTTCTACTAACCGAATGTAATCTCACTGGCCATTTGCCAACTCAAATCTGCTTAGGTGGCTCATTAGTATACTTTAGTGCTGAAGGCAACCATTTTACTGGTCCAGTTCCAACAAGCTTGAAGAATTGCTCTAGTATTGCCAGAATTGTTCTACATGGAAATCAAATAGAGGGAGACATAACAAAAGCTTTTGGCATATATCCAAATATGAAGTATATTGATCTAAGTGATAATAAATTTTATGGCCAAATTTCTCCAGACTGGGGGAAGAGCCATAGTCTCTTGAACTTGATCATGTCCAGCAATAATATTTCTGGCCATATACCAAAGCAAATTGCTGAGGCTGCTAAGCTAGGCAGGCTTCACCTTTCTTCAAACCAATTAACAGGACAGGTTCCAAAGGAGTTAGGGAGGTTGAAAAACCTGCTTGAACTCAAGATCAGTAACAATCATCTTTCAGGGAATATTCCATCAGAAATAGGATCACTGCAGAATCTTGAACGCTTGCATCTAGCAGGAAATGAGTTGAGTGGGAACATACCAACAGAAGTTGTTAAGTTACCCAACTTGTTGGAATTGAACTTGAGCAACAACAAGCTAGAGGGAAGCATCCCCGAGTTTCACATAACCCAACTTTTGTATTCTCTTGATCTTAGTGGGAATATGTTGCATGGACCAATACCAACAGTGCTTGGAGAGTTGAAACAATTGCAATTGCTGAACCTCTCTCACAATAATCTTTCTGGCACAATTCCATTAAGTTTTGATAGCATGTCAAGCTTGGTTTATCTCAACATATCATACAACCAGTTAGAAGGACCACTACCAAATAATGAAGCCTTTCTTCATGCTTCAATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTCACTGGCTTGGTGGCATGCCCAAGAATCAGTCCTATCCGCAAAAATCACAAGGTCGTGTTATTAGTATTACTTCTTGTCTTTGGAGTACTAATACTTATACTTTGTGTGGTGGCTATTTCAATGTATATTATTTGTAGAAGAGCCAGAATGAAAGAAGACCCGGCTAAGGAAGCAAAAGCAGAAGAACACTTTTCCATATGGAGCCATGATGGAAAAATGGCGTTCGAAACTATCATTGAAGCCACCAATAATTTTGATGACAAGTATCTCATTGGAATTGGAGGCCAAGGATCCGTATACAGAGCTGAGTTGCCAGGTATGGTTGTTGCTGTGAAGAAACTTCACATGGAATCAGATGCAGATGATAAGTTCAATTCGAAGGCATTTGAAAATGAGATCAAAGCATTGACAGAAATGAAGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCATTCACAATTCTCATTTTTGGTGTACAAGTACTTGGACGGTGGCAGTTTGGATCATGTACTAGGTGATGAAAAGCAAGCAACTGCATTTGACTGGGAAAGGCGGGTGAATGTGGTTAAAGGAGTTGCTAATGCTTTGTCATATATGCATCATGGTTGCAAACCCCCTATAGTTCACCGCGACATATCAAGCAAGAATGTCCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGTTAAGTTTCTACAGCCTGGTTCAAATTGGACCACACCTGCAGGAGTCACCTATGGCTATGGAGCTCCAGAGCTTGTTCAAACTATGGAAGTGACTGAAAAATGTGATGTATATAGTTTTGGAGTGCTTTGTTTCGAAATCCTTATGGGAAAGCATCCGGCAGATCTGATCAATTCATTGTTGTCGCCATCAACAGCTTCAATAACATACAATTTGCTATTGGTTGATGTAATTGATCAAAGGCCTCCTCATCCTGAGAAGTCAGTTGTTGGGGAAATCATGTTGATCACAAAGTGGGCGCTTGAGTGTTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTGTCTAAAGAACTCATGATGGGAAAATCATCTTTCTCTCATGACCACTTTCCCATGATCAGACTTGGACAACTCAATCAAGAATTATTGGAAACTCCACTTATGTGA 3222 0.4025 MNFIACRCRGIIILFIFLCVLVKLSSTYTMEANALLKWKASLDYQSKPTLSSWKNGTSPCRWKGIHCDKSRSITTMSLENFGLQGTLHTLNFSSFPSLLTINIYNNFFYGTIPPQIGNMSRVNILNFSKNSFEGSIPKEMWTLRSLQMLDLSLCSSLSGPIPGSIANLTNLTYLDLGSNNFSGSIPHEIGKLVNLNYLAVSGNHLSGFIPQEIGRLTNLTLLDLSENTLNGTIPSVITNLSYLNALLLDNNTLSGLIPPSLWNMSKLNYLFLNGNRLSGSIPASIGNLANLIGLTLDSNHLSGPIPSTIGNMTLLSYLFLGWNHFFGRIPASIGNLINLAILELEGNNFSGSIPDTIGNLKKLTRLDLSFNKFSSKLPQTMNNFTILEVFLLTECNLTGHLPTQICLGGSLVYFSAEGNHFTGPVPTSLKNCSSIARIVLHGNQIEGDITKAFGIYPNMKYIDLSDNKFYGQISPDWGKSHSLLNLIMSSNNISGHIPKQIAEAAKLGRLHLSSNQLTGQVPKELGRLKNLLELKISNNHLSGNIPSEIGSLQNLERLHLAGNELSGNIPTEVVKLPNLLELNLSNNKLEGSIPEFHITQLLYSLDLSGNMLHGPIPTVLGELKQLQLLNLSHNNLSGTIPLSFDSMSSLVYLNISYNQLEGPLPNNEAFLHASIESLKNNKGLCGNVTGLVACPRISPIRKNHKVVLLVLLLVFGVLILILCVVAISMYIICRRARMKEDPAKEAKAEEHFSIWSHDGKMAFETIIEATNNFDDKYLIGIGGQGSVYRAELPGMVVAVKKLHMESDADDKFNSKAFENEIKALTEMKHRNIIKLYGFCQHSQFSFLVYKYLDGGSLDHVLGDEKQATAFDWERRVNVVKGVANALSYMHHGCKPPIVHRDISSKNVLLDSEYEAHVSDFGTVKFLQPGSNWTTPAGVTYGYGAPELVQTMEVTEKCDVYSFGVLCFEILMGKHPADLINSLLSPSTASITYNLLLVDVIDQRPPHPEKSVVGEIMLITKWALECLSQSPQFRPTMHQVSKELMMGKSSFSHDHFPMIRLGQLNQELLETPLM 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03553 1073 Gene3D Ribonuclease Inhibitor 360 695 IPR032675 -
Arst4g03553 1073 Gene3D Phosphorylase Kinase; domain 1 734 851 - -
Arst4g03553 1073 FunFam Leucine-rich repeat receptor protein kinase MSP1 736 851 - -
Arst4g03553 1073 Pfam Protein kinase domain 775 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03553 1073 SUPERFAMILY Protein kinase-like (PK-like) 757 1043 IPR011009 -
Arst4g03553 1073 ProSitePatterns Tyrosine protein kinases specific active-site signature. 897 909 IPR008266 GO:0004672|GO:0006468
Arst4g03553 1073 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 187 280 - -
Arst4g03553 1073 Gene3D Ribonuclease Inhibitor 186 243 IPR032675 -
Arst4g03553 1073 Gene3D Ribonuclease Inhibitor 245 350 IPR032675 -
Arst4g03553 1073 FunFam MDIS1-interacting receptor like kinase 2 852 1049 - -
Arst4g03553 1073 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 385 698 - -
Arst4g03553 1073 PRINTS Leucine-rich repeat signature 219 232 - -
Arst4g03553 1073 PRINTS Leucine-rich repeat signature 576 589 - -
Arst4g03553 1073 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 339 1044 - -
Arst4g03553 1073 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 339 1044 - -
Arst4g03553 1073 Pfam Leucine rich repeat 602 660 IPR001611 GO:0005515
Arst4g03553 1073 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Arst4g03553 1073 Pfam Leucine rich repeat 162 205 IPR001611 GO:0005515
Arst4g03553 1073 ProSiteProfiles Protein kinase domain profile. 773 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03553 1073 SUPERFAMILY RNI-like 305 670 - -
Arst4g03553 1073 ProSiteProfiles Leucine-rich repeat profile. 578 600 IPR001611 GO:0005515
Arst4g03553 1073 FunFam MDIS1-interacting receptor like kinase 2 isoform A 281 381 - -
Arst4g03553 1073 Gene3D Transferase(Phosphotransferase) domain 1 852 1055 - -
Arst4g03553 1073 SMART LRR_typ_2 264 288 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 576 605 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 312 336 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 528 552 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 216 240 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 360 384 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 647 672 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 623 646 IPR003591 -
Arst4g03553 1073 SMART LRR_typ_2 168 192 IPR003591 -
Arst4g03553 1073 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Arst4g03553 1073 FunFam Nuclear pore complex protein NUP107 28 185 - -
Arst4g03553 1073 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Arst4g03553 1073 SUPERFAMILY RNI-like 76 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03553 Arst-Chr4 114078098 114124867 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03553 4 945 Receptor kinase-like Gene Family AT4G08850 42.842 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst4g03553 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03553 - - aip:107635237 1390.56