Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03551 ATGTTCCAAAAAATCAGGGTTATGATGGCATGCAAAGTAACTATATGCATAGTTCTCAGTGTCTTCATAAATATGGCCTCAGCTGCAATTGATGAAAACAGGGAAGCAAATGCACTCTTGAAGTGGAAGGCCACTCTTGACAGCCAAAGCCAAGTTAAGTTGTCATCTTGGAACAACGGCACAAGTCCATGCAGATGGAGAGGAATTCAGTGTGATAAAACAAAGTCAATCACAAGCATGGATATTCAAAATTTTGGACTCAAAGGTACACTTCATACTCTCACCTTCTCTTCATTCCCCAACCTCCTTAGCATAGACATCTACAACAACTTGTTCCATGGAACCATTCCTCCACAGATTGCTAACTTGTCCAGAGTTAATCACTTGAACTTGTCCAAAAACTTCTTTGAGGGTTCCATTCCTAAAGAGATCTTCACCTTGACAAGTCTTCGCGGGCTTGATCTTTTCGAATGCCAACTAAGTGGCCAAATCCCTGAGTCTATAGGAAATTTGTCCAACTTAACATATCTAGATTTTGGAAACAACAACCTCTCTGGCCACATTCCTACTGGGATTGGCAAGTTAACCAACCTTGAGTATTTTTCTTTTATAAATAATTCTCTTTCTGGTTCCATTCCAATGGAAATAGGAATGATGACAAATCTTCAGACGATTGAATTCTCATATAACACTCTCTCTGGTGTTATCCCTTCTACAATTGGTAACTTGAGCAATCTGCAACAAATTTACCTTCCTAATAACACACTATCTGGGCCAATCCCACCCTCTATCTGGAACATGTCTACTTTGACCTTGATATGGCTCTTTGGCAATGAACTTTCCGGATCTATCCCTAGTTACATAGATAACTTAGCCCCCAATTTGAACTCCCTATCACTTGATGACAACCACCTTTCTGGCACTATTCCTCCCACACTTGGAAATTTGACAAAGCTCACCGAACTATACCTGAGATTGAACAATTTTTCTGGACCAATTCCTTCCTCTATAGGTAATCTGTTCAATTTGAACTACTTGACTTTCCAATATAATAAACTCAGTGGATCCATTCCTGACACAATTGGAAACTTGAAAAGCCTCTTTTCATTAGAATTGTCCAACAACATGCTTACTGGCTCCATCCCACGGGGGATTAATAACATGACATTGTTGCAAGATTTTTTAGTGGCCCAAAACAATTTCACCGGTCATTTGCCACCTCAAATATGCTCAGGTGGGTCACTCATGTTCTTTGGTGCTGAGCACAACCATTTTACTGGCCCAGTTCCAAGAAGCTTGAAGAATTGCTCTAGTATTGTTAGAATCAAATTAGAGGGAAACCAGTTGGAAGGTGACATAGCAAAAGACCTTGGCATATATCCCAATTTGAAACATATTGATTTGAGTGATAATAAATTTTATGGCCAAATTTCATCAAACTGGGGCAAATGTCATAGTCTTGAGAACTTTATCATATCCAACAATAATGTTTCCGGTGGTATACCACCACAAATTGTGAAGGCTACCAAACTTGGCAGGATTCACCTTTCCTCAAACCGATTGACAGGGAAGATTCCGAAAGAATTAGGGAGAATGAAAAGTTTGCTTGAACTCAAGATCAGTGATAATCTTCTCTCAGGAAACATTCCAACAGAATTAGGATCACTGCAGAATTTGCAAATCTTGCATCTAGCAGGAAATGAGTTGAGTGGTAACATACCAACAGAAGTTGTTGAGTTACCCAACTTGTTGGAATTGAATTTGAGCAACAACAAGCTAGAGGGAAGCATCCCCTCTCACTTTGGTTCATTCCAACCTCTCTCTTCTCTTGATCTTAGCAGGAATTTCTTGAATGGAACTATTCCAAATGTGCTTGGACAGTTGACGCACTTGCAGTTGTTGAACCTCTCACACAATAATCTCTCTGGCAATATTCCATCCACTTTTGGTGGCATGTCAACCTTGACATCTGTCAATGTATCATACAACCAGTTAGAAGGGCCGCTTCCAGAAAGTAAGGCCTTTCGCACTGCTACAATTGAGTCACTGAAAGGTAACAAAGGCTTGTGTGGTAATGTCACTGGCTTGGTGCAATGCAAAACTAATAGCTATAGCCAAAAGAGTCACAAGGCCACGCTATTAGTATTGTTTCTTATCTTTGGAATACTAGTACTTGTGCTCTGTGTGGTGGGTGTTTCAATGTATATTATTTGTAGAAGTGTGAGAAAGAAAGGAGACTCAGCCAAAGAAATACAATCAGAAGAACATTTTTCCATATGGAGCCATGATGGAAAAATGGCATTTGAAACAATCATTGAAGCTACCAAGAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCTGTTTACAGAGCTGAGTTACCTTCAGGTATGGTTGTTGCTGTGAAGAAAATTCATGCAGAATCAGATCCAGAGGACAAGTCCAATTTGAAATCATTTAAAAGTGAAATCGAAGCACTGACAGAAATCAAGCACCGCAACATCATAAAGCTATATGGATTTTGCCAGCATTCCCGGTTCTCTTTTTTGGTTTATGAATTCTTGGAAGGTGGCAGTGTGGATCAAGTACTAAGCAATGAAGCACAAGCAAGTGCATTTGATTGGAAGAAGAGAGTGAATGTGGTTAGAGGAGTTGCTAATGCTTTATCATATATCCATCATGGTTGCGTGCCCCCTATAGTTCATCGTGACATATCAAGCAAGAATATTCTTTTGGATTCAGAAGATGAAGCTCATGTCTCTGATTTTGGGACCGCGAAGTTTCTAAAGCCAGGTTCAAATTGGACCACACTTGCAGTCACCTATGGCTATGGTGCTCCAGAGCTTGCTCAGAGTTTGGAGGTGACTACGAAAAGTGATGTATATAGCTTTGGAGTGCTTTGTTTCGAAATCCTTATGGGAAAGCATCCGGCAGATATGATAAATTCATTGTTGTCGCCATCAACAGCATCAATAACATACAATTTGCTATTGGTTGATGTAATTGATCAAAGGCCTCCTCATCCTGAGAAGTCAGTTGTTGGGGAAATCATGTTGATCACAAAGTGGGCGCTTGAGTGTTTGAGCCAAAGTCCACAATTCCGGCCAAGCATGCATCAAGTTTCCAAAGAACTCACGATGGGAAAATCACCTTTCTCTGATGACCACTTTCCCATGATCAGACTTGGACAACTCAATCAAGAATTATTGGAAACTCCAGTTGTGTGA 3237 0.4016 MFQKIRVMMACKVTICIVLSVFINMASAAIDENREANALLKWKATLDSQSQVKLSSWNNGTSPCRWRGIQCDKTKSITSMDIQNFGLKGTLHTLTFSSFPNLLSIDIYNNLFHGTIPPQIANLSRVNHLNLSKNFFEGSIPKEIFTLTSLRGLDLFECQLSGQIPESIGNLSNLTYLDFGNNNLSGHIPTGIGKLTNLEYFSFINNSLSGSIPMEIGMMTNLQTIEFSYNTLSGVIPSTIGNLSNLQQIYLPNNTLSGPIPPSIWNMSTLTLIWLFGNELSGSIPSYIDNLAPNLNSLSLDDNHLSGTIPPTLGNLTKLTELYLRLNNFSGPIPSSIGNLFNLNYLTFQYNKLSGSIPDTIGNLKSLFSLELSNNMLTGSIPRGINNMTLLQDFLVAQNNFTGHLPPQICSGGSLMFFGAEHNHFTGPVPRSLKNCSSIVRIKLEGNQLEGDIAKDLGIYPNLKHIDLSDNKFYGQISSNWGKCHSLENFIISNNNVSGGIPPQIVKATKLGRIHLSSNRLTGKIPKELGRMKSLLELKISDNLLSGNIPTELGSLQNLQILHLAGNELSGNIPTEVVELPNLLELNLSNNKLEGSIPSHFGSFQPLSSLDLSRNFLNGTIPNVLGQLTHLQLLNLSHNNLSGNIPSTFGGMSTLTSVNVSYNQLEGPLPESKAFRTATIESLKGNKGLCGNVTGLVQCKTNSYSQKSHKATLLVLFLIFGILVLVLCVVGVSMYIICRSVRKKGDSAKEIQSEEHFSIWSHDGKMAFETIIEATKNFDDKYLIGIGGQGSVYRAELPSGMVVAVKKIHAESDPEDKSNLKSFKSEIEALTEIKHRNIIKLYGFCQHSRFSFLVYEFLEGGSVDQVLSNEAQASAFDWKKRVNVVRGVANALSYIHHGCVPPIVHRDISSKNILLDSEDEAHVSDFGTAKFLKPGSNWTTLAVTYGYGAPELAQSLEVTTKSDVYSFGVLCFEILMGKHPADMINSLLSPSTASITYNLLLVDVIDQRPPHPEKSVVGEIMLITKWALECLSQSPQFRPSMHQVSKELTMGKSPFSDDHFPMIRLGQLNQELLETPVV 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03551 1078 SUPERFAMILY RNI-like 79 402 - -
Arst4g03551 1078 ProSiteProfiles Protein kinase domain profile. 778 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03551 1078 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Arst4g03551 1078 Gene3D Phosphorylase Kinase; domain 1 739 857 - -
Arst4g03551 1078 Gene3D Ribonuclease Inhibitor 390 702 IPR032675 -
Arst4g03551 1078 FunFam Piriformospora indica-insensitive protein 2 190 279 - -
Arst4g03551 1078 Pfam Leucine rich repeat 607 665 IPR001611 GO:0005515
Arst4g03551 1078 Gene3D Ribonuclease Inhibitor 189 291 IPR032675 -
Arst4g03551 1078 PANTHER LEUCINE RICH REPEAT KINASE 2 337 1053 - -
Arst4g03551 1078 PANTHER LEUCINE RICH REPEAT KINASE 2 337 1053 - -
Arst4g03551 1078 Gene3D Transferase(Phosphotransferase) domain 1 858 1058 - -
Arst4g03551 1078 FunFam Nuclear pore complex protein NUP107 32 189 - -
Arst4g03551 1078 FunFam MDIS1-interacting receptor like kinase 2 isoform A 284 385 - -
Arst4g03551 1078 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Arst4g03551 1078 SUPERFAMILY RNI-like 349 671 - -
Arst4g03551 1078 PRINTS Leucine-rich repeat signature 628 641 - -
Arst4g03551 1078 PRINTS Leucine-rich repeat signature 607 620 - -
Arst4g03551 1078 SUPERFAMILY Protein kinase-like (PK-like) 759 1048 IPR011009 -
Arst4g03551 1078 Pfam Leucine Rich Repeat 582 604 IPR001611 GO:0005515
Arst4g03551 1078 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 389 703 - -
Arst4g03551 1078 Pfam Protein kinase domain 780 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03551 1078 ProSitePatterns Tyrosine protein kinases specific active-site signature. 903 915 IPR008266 GO:0004672|GO:0006468
Arst4g03551 1078 FunFam Leucine-rich repeat receptor protein kinase MSP1 741 857 - -
Arst4g03551 1078 Gene3D Ribonuclease Inhibitor 292 368 IPR032675 -
Arst4g03551 1078 FunFam MDIS1-interacting receptor like kinase 2 858 1054 - -
Arst4g03551 1078 SMART LRR_typ_2 580 603 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 123 147 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 532 556 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 219 242 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 316 340 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 628 651 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 243 267 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 364 388 IPR003591 -
Arst4g03551 1078 SMART LRR_typ_2 171 195 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03551 Arst-Chr4 114033798 114037403 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03551 9 950 Receptor kinase-like Gene Family AT4G08850 43.900 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst4g03551 Pkinase 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03551 - - aip:107635237 1360.9