Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03548 ATGTCGAGAAAAAATCTCTTAATATTCCTCTTCTATGTCCTTGTGAAACTCTCTTGTGTGGCTTTAGCTGCAAGTGATGAGAAGAATGAAGAAGCAAATGCACTCTTAAAGTGGAAGACCACCCTTGATAACAAAAGCCAACTTATCTTGTCATCTTGGAACAACGGCACAAGTCCATGCAGATGGAAAGGAATTCAGTGTGACAAATCAAAGTCAATCACAACCATGAACATTGAAAATTTTGGACTCAAAGGTACACTCCACACTCTCACCTTCTCTTCATTCCCAAACCTCCTCAGCATAAACATATACAACAACTTGTTCCATGGAACCATTCCCCCACAGATTGGTAACTTGTCCAGAGTTAATCAATTGAACTTGTCCAAAAATTTCTTTGAAGGTTCCATTCCTAGAGAGATCTTCACCTTGACAAGTCTCCACGGGCTTGATCTTTTCGAATGCCATCTAAGTGACCAAATCCCTGAGTCCATAGGAAATTTGGCCAACTTAACATATCTAGATTTTGGAAACAACAATCTTTCTGGCCACATTCCTACTGGGATTGGCAAATTGGTCAACCTTGAGTATCTTTCTTTCATAGATAATTATCATCTTTCTGGTTCCATTCCAATGGAAATAGGAATGATGACAAACCTTCATACGATTGATTTCTCAAGCAACACTCTCTCTGGGGCTATCCCTCCTACCATTGGTAACTTGAGCAATTTGCAACAATTATACCTTTCTAATAACACACTCTCTGGGTCAATTCCACCCTCCATCTGGAACATGTCTAACTTGACCGCATTAGAGCTTAATAACAATAACCTTTATGGATCCATCCCTGCTTCCATAGAAAACTTGGCCAATTTAGATTCCCTTGCACTTGATGAGAATCACTTTTCTGGATCCATTCCTTCCACATTGGGAAACTTGACAAAGCTCTTCAGATTACACCTCGGCTTTAATAATTTTTCTGGACCAATTCCTGCCTCTATAGGTAATCTGGTCAATTTGAATTACTTGAGCTTCCATACAAACAACTTCTCTGGAACTGTCCCTGAAACAATTGGAAACTTGAAAGGCCTCCAGGAGCTAGAATTTTCCACCAACAAGTTTAATGGCACCCTTCCACAGGGCCTTAATAACTTGACAAGTTTGAAGATGTTTTCAGTGTCCAATAACAATTTCATTGGCCGTTTGCCAACTCAAATCTGCTCAGGTGGATTACTCTCAGACTTCAATGCTGAGAACAACCATTTTACTGGTTCAGTGCCAAGAAGCTTGAAGAGTTGCTCTAACATTGCTAGACTCACATTACAGGGAAACCAGTTGGAAGGTGACATTGCAGAATTTTTCGGCATATATCCGAATTTAGTACATATTGATCTGAGTGATAACAAGTTTTACGGTCAGATTTCTCCAAACTGGGGAAAGAGCCCTAAGCTTCAGAGCTTGTACATGTCCAACAACAATATTTCTGGTGCTATACCACCACAAATTGTTGAGGCTACTAATCTGGGTATGCTTCGCCTTTCTTCAAACCAACTGAATGGAAGGATTCCAGAAGAACTAGGGAATATGAAAAACTTGTTCGAACTCAGTATCAGTAACAATCATCTCTCAGGAAGCATTCCACCAGAAATAGGATCATTGAAGAATCTGACATTCTTGCGCCTAGCAGGAAATGATTTAAGTGGCAACATTCCAAGAGAAGTTATGCAGTTACCCAAATTGGTTGAATTGAACTTGAGCATCAACAGACTAGAGGGAAGCATCCCCTCTGGCATTGCCTCATTGACACCTCTCTCTTCTCTTGATCTTAGCAACAATTTGTTGAATGGAACAATACCAAGGTGGCTTGGAGATCTGACGCAATTGAACTTCTTGAACCTCTCTCACAATGATCTCTCTGGCAATATTCCCTCCAGTTTTGATGGCATGTCAGCCTTGATTTCAGTCAACATATCACACAACCAGTTAGAAGGGCCGCTTCCAAACAATCGAGCTTTTCTTAATGCTCCAATTTGGTCCTTGAAAAGTAACAAAGGCTTGTGTGCTAACAATGTCACCGGCTTGGAGCGATGCACAAAGAAGCATAGCCTAAAGATGGTATTGATTCTTATCTTTGGAGCACTTGCTCTAGCACTTTGTTTGTTAGGTGTTTCAATGTATATTCTTTACAGAAGAGGCAGAAAGAGAGAAGATGAAGTTAAAGAAGTGCAATCAAAAGAGCACTTTTCCATATGGAGCCATGATGGGAAAATGGCATTTGAAACAATCATTGAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAAATGGAGGGCAAGGATCTATTTACAAGGCTGAGTTGCCTTCAGGTATGGTTGTTGCAGTGAAGAAGCTTCATGAGAAGACTGCTATTGGGGAGGAGACATACAATTTGAAAGCATTTGAGAATGAAATCAAAGCATTGACAGAAATGAAGCACCGCAACATGATAAAGCTATATGGGTTTTGCCAACATTCACGGTTCTCATTTTTGGTTTATAAGTACTTGGAAGGTGGAAGCTTGGATCAAGTGCTAAGAGATGAAGTGAAAGCAAGTAAATTTGATTGGGGAAAGAGGGTGAATGTGATTAAAGGAGTTGCTAATGCTCTATCATATATGCATCATGATTGCATACCTCCTATAGTTCATCGCGACATATCGAGCAAGAATGTCCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGTTTCTTAAGCCTGATTCAAGTTGGACAACACTTGTAGTCACCTATGGATATGGAGCTCCTGAGCTAGCTCAGACTATGGAAGTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATCCTCATGGGAAAGCATCCAGGAGATTTGATCAACTCATTGTTGTCGCCAACAACAGCATCAATAACATACAATTTGTTATTGGTTGATGTGATGGATCAGAGGCCACCACATCCTAAGAATTCAATTGTTGGGGAAATCATGTGGATCACAAAGTGGGCACTTGAGTGCTTGAGACAAAGTCCACAATCACGTCCAAGCATGCATCAGATTTCTAAAGAGCTTATGATGGGAAAGTCACCTTTAGCTAATCGCCAGTTTCCTATGATCAGAATTGGGCAACTCATTGAAGAAGGATCGGGGAGTGCACTTACGTGA 3210 0.4037 MSRKNLLIFLFYVLVKLSCVALAASDEKNEEANALLKWKTTLDNKSQLILSSWNNGTSPCRWKGIQCDKSKSITTMNIENFGLKGTLHTLTFSSFPNLLSINIYNNLFHGTIPPQIGNLSRVNQLNLSKNFFEGSIPREIFTLTSLHGLDLFECHLSDQIPESIGNLANLTYLDFGNNNLSGHIPTGIGKLVNLEYLSFIDNYHLSGSIPMEIGMMTNLHTIDFSSNTLSGAIPPTIGNLSNLQQLYLSNNTLSGSIPPSIWNMSNLTALELNNNNLYGSIPASIENLANLDSLALDENHFSGSIPSTLGNLTKLFRLHLGFNNFSGPIPASIGNLVNLNYLSFHTNNFSGTVPETIGNLKGLQELEFSTNKFNGTLPQGLNNLTSLKMFSVSNNNFIGRLPTQICSGGLLSDFNAENNHFTGSVPRSLKSCSNIARLTLQGNQLEGDIAEFFGIYPNLVHIDLSDNKFYGQISPNWGKSPKLQSLYMSNNNISGAIPPQIVEATNLGMLRLSSNQLNGRIPEELGNMKNLFELSISNNHLSGSIPPEIGSLKNLTFLRLAGNDLSGNIPREVMQLPKLVELNLSINRLEGSIPSGIASLTPLSSLDLSNNLLNGTIPRWLGDLTQLNFLNLSHNDLSGNIPSSFDGMSALISVNISHNQLEGPLPNNRAFLNAPIWSLKSNKGLCANNVTGLERCTKKHSLKMVLILIFGALALALCLLGVSMYILYRRGRKREDEVKEVQSKEHFSIWSHDGKMAFETIIEATNNFDDKYLIGNGGQGSIYKAELPSGMVVAVKKLHEKTAIGEETYNLKAFENEIKALTEMKHRNMIKLYGFCQHSRFSFLVYKYLEGGSLDQVLRDEVKASKFDWGKRVNVIKGVANALSYMHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGTAKFLKPDSSWTTLVVTYGYGAPELAQTMEVTEKSDVYSFGVLCLEILMGKHPGDLINSLLSPTTASITYNLLLVDVMDQRPPHPKNSIVGEIMWITKWALECLRQSPQSRPSMHQISKELMMGKSPLANRQFPMIRIGQLIEEGSGSALT 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03548 1069 SUPERFAMILY L domain-like 375 473 - -
Arst4g03548 1069 FunFam MDIS1-interacting receptor like kinase 2 isoform A 282 381 - -
Arst4g03548 1069 SMART LRR_typ_2 119 143 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 336 360 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 624 647 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 240 264 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 384 408 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 167 191 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 576 600 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 288 312 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 481 504 IPR003591 -
Arst4g03548 1069 SMART LRR_typ_2 528 552 IPR003591 -
Arst4g03548 1069 FunFam MDIS1-interacting receptor like kinase 2 849 1045 - -
Arst4g03548 1069 Gene3D Ribonuclease Inhibitor 359 699 IPR032675 -
Arst4g03548 1069 PRINTS Leucine-rich repeat signature 603 616 - -
Arst4g03548 1069 PRINTS Leucine-rich repeat signature 624 637 - -
Arst4g03548 1069 SUPERFAMILY Protein kinase-like (PK-like) 751 1039 IPR011009 -
Arst4g03548 1069 Pfam Protein kinase domain 770 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03548 1069 ProSitePatterns Tyrosine protein kinases specific active-site signature. 894 906 IPR008266 GO:0004672|GO:0006468
Arst4g03548 1069 SUPERFAMILY L domain-like 30 301 - -
Arst4g03548 1069 FunFam Leucine-rich repeat receptor protein kinase MSP1 731 848 - -
Arst4g03548 1069 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 385 700 - -
Arst4g03548 1069 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Arst4g03548 1069 Gene3D Ribonuclease Inhibitor 216 292 IPR032675 -
Arst4g03548 1069 Gene3D Ribonuclease Inhibitor 143 215 IPR032675 -
Arst4g03548 1069 Gene3D Transferase(Phosphotransferase) domain 1 849 1050 - -
Arst4g03548 1069 FunFam Nuclear pore complex protein NUP107 28 184 - -
Arst4g03548 1069 SUPERFAMILY RNI-like 234 660 - -
Arst4g03548 1069 ProSiteProfiles Protein kinase domain profile. 768 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03548 1069 SMART LRR_sd22_2 600 626 - -
Arst4g03548 1069 SMART LRR_sd22_2 167 199 - -
Arst4g03548 1069 SMART LRR_sd22_2 264 290 - -
Arst4g03548 1069 SMART LRR_sd22_2 216 242 - -
Arst4g03548 1069 SMART LRR_sd22_2 360 383 - -
Arst4g03548 1069 Gene3D Phosphorylase Kinase; domain 1 729 848 - -
Arst4g03548 1069 Gene3D Ribonuclease Inhibitor 293 358 IPR032675 -
Arst4g03548 1069 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Arst4g03548 1069 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 185 281 - -
Arst4g03548 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 318 1040 - -
Arst4g03548 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 318 1040 - -
Arst4g03548 1069 Pfam Leucine rich repeat 577 637 IPR001611 GO:0005515
Arst4g03548 1069 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03548 Arst-Chr4 113938530 114012814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03548 7 941 Receptor kinase-like Gene Family AT4G08850 44.538 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst4g03548 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03548 - - aip:107635237 1314.29